Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02926 ATGGAGTTTCTCCTTCTTCTCATCCTCCTCCTCCTCTCCCTCTTCTCTCATTCCTCCTCCGCTGCTCTCTCCCCCGACTACTACCGGAGCTCCTGCCCTGCGTTTTCTCAAATCATCCGCGACACCGTCACCAACAAACAAATCACCAACCCCACTACTGCCGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCTAACGGCTGCGACGCCTCCATCCTCATCTCCTCTACCCCCTTTAACGCCGCTGAACGCAACGCCGACATCAACCTATCTCTCCCCGGCGATGCCTTCGACATTGTCGTTCGTGCTAAAACAGCTCTCGAACTCTCCTGCCCCAACACCGTCTCCTGCGCCGACATCCTTGCGGCCGCCACTCGTGACCTCCTCACCATGGTCGGCGGCCCTTACTACACCGTCTTCCTTGGCCGCAAAGACGCCAAGGTTTCCAAAGCCTCCGGTATCGAAGGTACGCTCCCTAGACCCACCATGTCCGTTTCTGAGATCATCAGAATCTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTGGCATTAAGCGGGGCTCATTCAATTGGGTTCTCGCATTGCAAGGAATTCACCACTGAGATCTTCAATTACAGCAACAGCCACTACAATCCAAGATTTGCATTAGGGTTACAGAGAGCTTGCGCCGATTACAAGAAGAATCCAACTCTCTCTGTTTTCAACGATGTAATGACGCCGAACAAATTCGATAACATGTACTTCAAAAATCTGCAAAAGGGTCTAGGGCTCTTGAAGTCCGATGGTGGATTGTATAGCGATTCAAGAACGAGACCATGGGTGGAGAAATATGCTGCTGATGAGAGTGTGTTCTTCGCCGCGTTTTCTCAAGCGATGATGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGTATTTAACTGA 960 52.08 MEFLLLLILLLLSLFSHSSSAALSPDYYRSSCPAFSQIIRDTVTNKQITNPTTAAATLRLFFHDCLPNGCDASILISSTPFNAAERNADINLSLPGDAFDIVVRAKTALELSCPNTVSCADILAAATRDLLTMVGGPYYTVFLGRKDAKVSKASGIEGTLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFTTEIFNYSNSHYNPRFALGLQRACADYKKNPTLSVFNDVMTPNKFDNMYFKNLQKGLGLLKSDGGLYSDSRTRPWVEKYAADESVFFAAFSQAMMKLGGYGVKVGNEGEIRRRCDVFN* 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29698277 29699236 + CsaV3_5G037450.1 Csa05g02926 531313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02926 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PANTHER - 4 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PANTHER PEROXIDASE 31 4 319 - -
Csa05g02926 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Csa05g02926 319 Gene3D - 26 315 - -
Csa05g02926 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Csa05g02926 319 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Csa05g02926 319 Gene3D Peroxidase, domain 2 162 299 - -
Csa05g02926 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02926 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00179 Csa-Chr1:1163120 Csa05g02926 Csa-Chr5:29698277 9.34E-121 dispersed
Csa03g03898 Csa-Chr3:34204986 Csa05g02926 Csa-Chr5:29698277 3.37E-168 dispersed
Csa05g02926 Csa-Chr5:29698277 Csa06g03007 Csa-Chr6:25927418 5.35E-95 dispersed
Csa02g02390 Csa-Chr2:21178967 Csa05g02926 Csa-Chr5:29698277 7.03E-19 transposed
Csa06g01692 Csa-Chr6:14861785 Csa05g02926 Csa-Chr5:29698277 1.97E-16 transposed
Csa01g00826 Csa-Chr1:5207608 Csa05g02926 Csa-Chr5:29698277 6.93E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02926 K00430 - csv:105435603 608.216