Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g03046 ATGGCCTTAGCCATGGTGATTATTGCTCTCTTTTTACTCCTCCTCTTTTGCTCCGCTTTACTCCGATGGAATGAAGTTCGATACAGCAAAAAAGGGTTGCCTCCCGGTACAATGGGATGGCCTATTTTTGGTGAAACCACTGAGTTTCTTAAACAAGGTCCAAATTTTATGAAATCTCAAAGAGCAAGGTATGGGAGCATTTTCAAGTCGCATATTTTGGGGTGTCCTACCATTGTTTCTATGGATCCAGAAGTGAATCGATATGTCTTAATGAATGAATCAAAAGGACTCGTTCCTGGTTACCCTCAATCCATGCTTGATATACTCGGAAAATGCAATATCGCCGCCGTACACGGCAGCGCTCATAAGCTTATGAGAGGTGCTCTGCTTGCTATTGTTAGTCCCACCATGATTAAAGATCGTCTTCTTCCTAACATTGATGAGTTTATGCGATCCCATTTGAGTAATTGGGATAATCAAATCATTGATATACAAGAAAAAACTAAAGAGATGGCTCTCCGCTCATCTATGAAGCAGATTGCCGGATTCGAATCCGGTCCGTTATCGGAATCTTTCACCCCTGAGTTCTTTAAGTTAGTCCTCGGCACTCTCTCTCTCCCTATCGATCTTCCCGGCACGAATTACCGCCGAGGAATTCAGGCGAGGAAGAACATTATAAAGCTATTGGAACAGCTGATTAAAGAGAGAAGAGATTCAAAGATTCAAAAAAATGACATGCTTGGTTATTTTATGAGTGAAGAAAACAAATATAAACTAAATGATGAAGAGATTATTGATCAAATCATTACTGTTTTGTATTCTGGCTATGAAACTGTTTCAACAACTTCAATGATGGCTGTAAAGTTCCTCCATGATCATCCCAAAGTTCTTCAGCAACTAAGAGAAGAACATTTAGCAATAAGAGAGAAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCAATGAAATTCACTCGTGCGGTGATATTTGAAACATCAAGGTTGGCTACTATTGTTAATGGGGTTTTGAGGAAAACTACAAAAGATATGGAATTAAATGGCTTTCTAATTCCAAAAGGATGGAGGATTTATGTGTATACAAGAGAGATCAACTATGACCCTTTTCTTTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGATAACAACTTAGAGTCCAATAATTACTTCTTCATCTTTGGTGGTGGAACAAGACTTTGTCCTGGCAAAGAATTGGGAATTGCTGAGATTTCTACTTTCTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTCTTGAAATTTCCAAGAGTGGAAGCACCAAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1392 39.22 MALAMVIIALFLLLLFCSALLRWNEVRYSKKGLPPGTMGWPIFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGSAHKLMRGALLAIVSPTMIKDRLLPNIDEFMRSHLSNWDNQIIDIQEKTKEMALRSSMKQIAGFESGPLSESFTPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLEQLIKERRDSKIQKNDMLGYFMSEENKYKLNDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDNNLESNNYFFIFGGGTRLCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY* 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30611740 30616761 + CsaV3_5G038650.1 Csa05g03046 531433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g03046 463 SUPERFAMILY Cytochrome P450 27 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PANTHER CYTOCHROME P450 26 6 461 - -
Csa05g03046 463 Pfam Cytochrome P450 34 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 461 - -
Csa05g03046 463 Gene3D Cytochrome P450 24 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g03046 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g02016 Csa05g03046 CCT
Csa03g02016 Csa05g03046 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01861 Csa-Chr4:18349295 Csa05g03046 Csa-Chr5:30611740 0 dispersed
Csa06g03288 Csa-Chr6:27579040 Csa05g03046 Csa-Chr5:30611740 1.84E-76 dispersed
Csa05g03046 Csa-Chr5:30611740 Csa07g02396 Csa-Chr7:22043310 2.77E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g03046 K09590 - csv:101206858 919.842