Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00029 | ATGTGGGAGCCCTCCTTGGTGGCGTGGTCATTTTTCATTCTTACATTGTTGTTCACTACTTTTCTTCCAAACATATTAAAAAAGAAAAAGTACAATGATCAAAATGATCAAAATGATCAAAGTCGAACAAGATACAAATTTCCTTCCGGGAGAAGAAGTTGGCCTGTTATAGGTGATAGCTTCAACTGGTACTCTGCCATTGCAAGTTCGCATCCTTCCAAGTACGTTGAAGAACAAGCCAAAAGATACGGGAAGATCTTCTCGTGTCGTGTTTTTGGCAAATGTACAGTGGTATCGGTCGATCCAGATTTTAATAGGTATGTGATGCAAAACGAAGGGATATTGTTTCAATCGAGCTATCCCAAGTCTTTTAGAGATTTAGTAGGCGTAAACGGTGTTATCACGGCTCAAGGAGAACAACAGAGGAAACTCCATGGAATTGCTTCCAATTTTATGCGTATAAACAAACTCAACTTTAGCTTCATAAAAGAAATTCAAACCATAATCATCCATTCCTTGACCACTTTCCATGACCGTCATCAAATCATCTCTCTCCAAGATGCTTGCAGGAAGATTGCCATTAATCTTATGGTAAGTCAGCTACTGGGTGTGTCAAGTGATTCGGAAGTGAACGAGATCAGTGGTTTATTTTACGACTTTGTAGATGGTTGTCTTTCTTTCCCTATCAATTTACCTCCCTTTGCCTATCACTCTGCCATGAAGGCAAGGAAGCAAATCATAAGAAAAATAAAGAAGAAAATAGAGATGCAGAAATCAATGGAAAAGAGTAGTAGTAGTGGGCATGGAGTTCTTGGAAGACTATTAGAGGAACAAAAGCACTTATGTGATGAGGCAGTTGAAGATTTCATAATCAATCTTCTTTTTGCCGGCAATGAAACCACTTCTAAGACAATGCTTTTCGCAGTCTATTACCTAACCCACTCACCTAAAGCATTTGAGCAACTCATGGAAGAACAAGATGGTTTGAGAAATAAGTGTGGAGACAATACAGTCACATGGGAGGATTATAAATCAATGTCATTTACCCAATGTGTTATTGATGAGACACTTCGACTCGGAGGAATTGCAATTTGGTTGATGAGAGAGACAAAAGAAGAGATTAAATACTCAGATTATGTGATTCCAAAGGGAACTTTTGTTGTTCCATTTCTTTCTGCTGTACATTTGGATGAGAATATTTATGATGAAGCTTTAACCTTTAATCCTTGGAGATGGATGCAGCTTCAAAATCAGGAAAAGAGAAATTGGAAAAGTAGCCCATATTTTGCACCATTTGGAGGAGGGGGTAGATTGTGCCCGGGAGCTGAATTGGCTCGTCTTCAAATTGCTCTATTTCTCCATCACTTTCTTACCAACTATAGGTGGACACAAATTAAAGAAGATAGAATGTCTTTCTTTCCCTCGGCTCGACTAGTTAATGGCTTTCAAATTCGCTTGGAAAGACGGGAACACTGA | 1476 | 38.89 | MWEPSLVAWSFFILTLLFTTFLPNILKKKKYNDQNDQNDQSRTRYKFPSGRRSWPVIGDSFNWYSAIASSHPSKYVEEQAKRYGKIFSCRVFGKCTVVSVDPDFNRYVMQNEGILFQSSYPKSFRDLVGVNGVITAQGEQQRKLHGIASNFMRINKLNFSFIKEIQTIIIHSLTTFHDRHQIISLQDACRKIAINLMVSQLLGVSSDSEVNEISGLFYDFVDGCLSFPINLPPFAYHSAMKARKQIIRKIKKKIEMQKSMEKSSSSGHGVLGRLLEEQKHLCDEAVEDFIINLLFAGNETTSKTMLFAVYYLTHSPKAFEQLMEEQDGLRNKCGDNTVTWEDYKSMSFTQCVIDETLRLGGIAIWLMRETKEEIKYSDYVIPKGTFVVPFLSAVHLDENIYDEALTFNPWRWMQLQNQEKRNWKSSPYFAPFGGGGRLCPGAELARLQIALFLHHFLTNYRWTQIKEDRMSFFPSARLVNGFQIRLERREH* | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 208797 | 215212 | - | CsaV3_6G000290.1 | Csa06g00029 | 531656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 74 | 97 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 287 | 313 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 346 | 362 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 379 | 393 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 395 | 413 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 423 | 439 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | E-class P450 group IV signature | 439 | 457 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PANTHER | CYTOCHROME P450 SUPERFAMILY PROTEIN | 33 | 487 | - | - | |
Csa06g00029 | 491 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g00029 | 491 | Gene3D | Cytochrome P450 | 36 | 489 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | PANTHER | CYTOCHROME P450 26 | 33 | 487 | - | - | |
Csa06g00029 | 491 | SUPERFAMILY | Cytochrome P450 | 42 | 489 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00029 | 491 | Pfam | Cytochrome P450 | 48 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g00029 | Csa-Chr6:208797 | Csa07g02396 | Csa-Chr7:22043310 | 3.35E-87 | dispersed | |
Csa06g00029 | Csa-Chr6:208797 | Csa03g04086 | Csa-Chr3:35819170 | 1.97E-90 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00029 | - | - | csv:101205087 | 946.806 |