Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00061 | ATGGACGTGGGATTCGCTTTAGTTATAGTAACAGCAGTAACGGCGTATCTTCTTTGGTTTACTTTCATTTCACGGTCGTTAAAAGGCCCTCAAATGTGGCCGTTGCTCGGCAGCCTCCCTGGGTTAATCGAAAATTGCGACCGGTTGCATGATTGGATCTCCGATAACCTCCGCGCCTGTGGCGGCACCTACCAAACCTGCATCTGGGCTTTCCCTTTCTTCGCTAAAAAGCAAGGCCTCGTTACTGTCACGTGTGACCCGAGAAATCTCGAACATATTCTCAAGACCCGATTCGATAATTACCCCAAAGGCCCCACCTGGCAAGCTGTTTTTCACGAGTTGCTTGGTCAAGGCATTTTTAACTCCGACGGTGATACCTGGCTTTTCCAAAGAAAAACTGCTGCTTTGGAATTTACTACCAGGACTCTTCGTCAAGCCATGGCTCGTTGGGTTAGCCGCGCTATTAAGTTGCGATTTTGCCCTATTCTCAAAGAAGCTGAGTTGAATTCTCACCCCATTGATCTTCAAGATGTACTATTACGTCTTACTTTTGATAATATTTGTGGTTTGGCTTTTGGAAAAGATCCAATGACTTGTGCCCCCGGTTTCCCCGAAAATGGCTTTGCTATGGCTTTCGATCGAGCCACGGAAGCTTCGTTGCAACGGTTTATTCTACCGGAAGTGCTTTGGAAATTCAAAAAGTGGCTTCGGCTAGGGATGGAAGTCAGCTTGAGCCGGAGTTTAGTTCATATTGAGGAGTATTTATCTAGTGTGATTGATTCACGTAAGCTGGAGTTGCTGAATCAGCCTAAGGACTCCACACCACACGATGATTTACTCTCACGGTTCATGAAGAAAAAGGATGGTAATTACTCCAACGCGTTTCTTCGCCATGTGGCGCTTAATTTCATCCTAGCTGGACGTGACACGTCATCCGTAGCGCTGAGCTGGTTTTTCTGGTTGGTAACATTAAACCCACTCATTGAAGAAAAAATCCTCCGTGAGATCTGCACGGTTCTCATCGAGACACGTGGAAACAACATCCAATCATGGCTCGATGAACCTTTAGAATTCGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTAAGACTCTACCCGTCGGTACCAGAAGATTCCAAACACGTCGTCGCCGACGACATTCTGCCGGACGGAACCTTCGTTCCGGCGGGATCATCGGTAACGTATTCAATCTATTCCACCGGAAGAATGAAGTCGACATGGGGAGAAGACTGCCTCGAATTCCGTCCTGAGCGATGGTTAACAGCGGATGGAACGAAATTCATAGCGTATGATCCGTACAAATTCGTATCGTTCAATGCAGGGCCAAGAATCTGCCTAGGGAAGGACTTAGCGTATTTACAAATGAAGTCGATAGCAGCAGCTGTGCTACTCCGGCACCGGCTGACAGTAGCGGCGGGGCACAAAGTGGAACAAAAAATGTCATTGACGCTGTTTATGAAGTACGGACTGAAGGTGAACATTCACAAGAGGAATTTGGAGGGAATTGTGGAGAGTATGAGGGGCAAATACGGGAATTCGCAAGGGAAAGATAGTCCGTTAATCACGGTTGTGAATTGTAACGGAGGATGTAACGGAATGAAGTAG | 1644 | 47.08 | MDVGFALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKEAELNSHPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQPKDSTPHDDLLSRFMKKKDGNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPLIEEKILREICTVLIETRGNNIQSWLDEPLEFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGTKFIAYDPYKFVSFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNIHKRNLEGIVESMRGKYGNSQGKDSPLITVVNCNGGCNGMK* | 548 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 403217 | 405876 | - | CsaV3_6G000610.1 | Csa06g00061 | 531688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00061 | 547 | PANTHER | CYTOCHROME P450 | 7 | 523 | - | - | |
Csa06g00061 | 547 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | SUPERFAMILY | Cytochrome P450 | 21 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | PANTHER | CYTOCHROME P450 86A2 | 7 | 523 | - | - | |
Csa06g00061 | 547 | Pfam | Cytochrome P450 | 28 | 497 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | Gene3D | Cytochrome P450 | 24 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00061 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02870 | Csa-Chr3:27472038 | Csa06g00061 | Csa-Chr6:403217 | 2.67E-118 | dispersed | |
Csa06g00061 | Csa-Chr6:403217 | Csa07g01975 | Csa-Chr7:19392733 | 1.42E-150 | dispersed | |
Csa01g02499 | Csa-Chr1:22072491 | Csa06g00061 | Csa-Chr6:403217 | 0 | transposed | |
Csa05g00271 | Csa-Chr5:1665164 | Csa06g00061 | Csa-Chr6:403217 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00061 | K15398 | - | csv:101221526 | 1120.53 |