Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00062 ATGTCGAAAGAAGAAGACACCAAAGCTACCAGGAGGACAACCCGGTCCTCTTCAGCTGCTGTTCTAAGGGATTCTGGTGAAATAAAGAAGAAATGTGGTCCACATATTCCAACTTTTAATGATCTCGTTTTTGGAGAAGATAACATTAGTAAGGAAGATCTCCTGTCTAATTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTCTATGGTGGCACGTCAACGGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAATCGTCCTTTTGTCTACTCGAGCTGTCGTACATGTTATAGTTTGCGAACTCTATTTGAGTCTATCTTGAATCAGTTATTACTTCACGAAAAAGATGCAGACAATGGATATTTGAGTGCAAAACGCTGTGAAAAAACATCAGATTTTGTTAACTCTCTACGTGAAGCCTTAGTTAAAGTTGTAAAAACTCTCCAGGGGAACCCAGGAAAGATAGGCACCAAGAAGTTGACTGGACAAGGGCATGGACATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCCTTTCTGTTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCTGATACATACTATTCAAATATGGGTTACTTGGATCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATAAGGAATCAAACCAATCAAGAGATGTATTCTTCCTTTTTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACACGTGAATGAGCTATCCATAGCGTTTTCATCATTGTATAAAACATACTGTGAAGCTTCAGATGATCTGAACGACGTTCCCAACGAGTCCAGCAAGAGGGCACGTTTCAGTCGTTTTCAGCCACATATCTCCCCTGCCTTGAATCAGATATTTAAAATTTCATCTCCACCTTCTGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGCTGGTAGTAAGAAGTTTGGTGGGTGTGACTCTTCTGAGCATTTGGATTTTCACATGTCAACTTCTGCAAAATATCTTCTTCTTTCAGCATTTCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCTCTAGCAGTAGAAAAAGAAAGAAGAGGAGTTGCTTATGA 1260 39.21 MSKEEDTKATRRTTRSSSAAVLRDSGEIKKKCGPHIPTFNDLVFGEDNISKEDLLSNFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSTGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFESILNQLLLHEKDADNGYLSAKRCEKTSDFVNSLREALVKVVKTLQGNPGKIGTKKLTGQGHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLDPIPVYFSEYTEDDLRKIFIRNQTNQEMYSSFLSVVLGPFYRITRHVNELSIAFSSLYKTYCEASDDLNDVPNESSKRARFSRFQPHISPALNQIFKISSPPSEVNNLKEAKRKAGSKKFGGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGSSSRKRKKRSCL* 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 412363 420261 - CsaV3_6G000620.1 Csa06g00062 531689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00062 419 Gene3D - 58 238 IPR027417 -
Csa06g00062 419 MobiDBLite consensus disorder prediction 1 21 - -
Csa06g00062 419 Pfam AAA ATPase domain 57 217 IPR041664 -
Csa06g00062 419 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 248 416 IPR020796 GO:0000808|GO:0005634|GO:0006260
Csa06g00062 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 265 IPR027417 -
Csa06g00062 419 MobiDBLite consensus disorder prediction 400 419 - -
Csa06g00062 419 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 49 417 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00062 K02607 - csv:101223023 800.045