Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00134 | ATGGACTTTCTTCACCTCAAAGGCGCCTCCACCGCTGCCGCTGCCGCTGCCGATAGTACAACCAGTGCTTCGTCGTCGTCGTCGTCTGGTGGACGCAAACGCCGCAGTATGCATTCGGTTTCAAGGAGGTGTGAAAATGAAGAGCATGAAAACAGGGGACAGAGGAAAGATGATGATGATGATGAAGATAACGTTGTTGTTGATGATGATGTTAAATATGGAGTTACTTCTGTTTGTGGAAGAAGAAGAGAAATGGAGGATATGGTTTCTGTTCATCTTTATTTTACTAATGAAAAGAATCTACCCCAAATTCCCATTCACTTTTTTGGGGTCTTCGACGGCCATGGCTGCTCTCATGTTTCGATGAGCTGTATGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAAACGAATTAGAAGAAACAGAGGAGTGGAAGAAAATAATGAAGAGAAGCTTTAGGCGTATGGATGAGGAAGTGATGAAGGAGTACTCAAATAATATTAAACAGAGAGATGCTGCCGTTGCCGGCTCCTCCTCCTCCTCCTCCTCCTCCCACAATATTAGTTGCAGATGCGAACTCCAAACTTCTCATCAATATGACACCGTCGGATCAACTGCTCTGATTGTGTTATTGATGCCCCATAAGCTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAACTACTGGAATCCTCCCTCTTTCCTCCGACCATAAGCCGGATCGACCAGATGAATTGTCGAGAATAGAATCTGGAGGTGGGCACGTGATCCATTGGGAAGGGGCGAGGGTGTTGGGAGTTTTAGCAATGTCAAGAGCGATAGGCGACAGTTCTTTAAAACCTTACGTAATATCAGAGCCGGAGGTGGTGGTAATGGATCGAAGAATGGAGGATGAGTTTATCATACTGGCTACTGATGGCTTGTGGGACGTCGTTACAAATGAAACTGCGTGCGACGCAGTTCGAACATGCATGCGAGCACAGCGAGCGTCCTCGTCGTTGTCTTTGTTAGAAGAATCATCTGGTTCTATGGGCGGCGGCTCTGACAAAACATGTTCTGACGCCTCTATCTTGCTGACAAAGTTGGCGATCGCCAAGCATAGTTCAGATAACATTAGCATTGTGGTTATAGATTTGAGAAATACACATCATCATCATCATCACCACCACCACCACCACCACTGCTAA | 1209 | 46.32 | MDFLHLKGASTAAAAAADSTTSASSSSSSGGRKRRSMHSVSRRCENEEHENRGQRKDDDDDEDNVVVDDDVKYGVTSVCGRRREMEDMVSVHLYFTNEKNLPQIPIHFFGVFDGHGCSHVSMSCMNRMHEIVKEEIDENELEETEEWKKIMKRSFRRMDEEVMKEYSNNIKQRDAAVAGSSSSSSSSHNISCRCELQTSHQYDTVGSTALIVLLMPHKLIIANCGDSRAVLSRKTTGILPLSSDHKPDRPDELSRIESGGGHVIHWEGARVLGVLAMSRAIGDSSLKPYVISEPEVVVMDRRMEDEFIILATDGLWDVVTNETACDAVRTCMRAQRASSSLSLLEESSGSMGGGSDKTCSDASILLTKLAIAKHSSDNISIVVIDLRNTHHHHHHHHHHHHC* | 403 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 877776 | 879651 | + | CsaV3_6G001340.1 | Csa06g00134 | 531761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00134 | 402 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Csa06g00134 | 402 | PANTHER | ALPHABET, ISOFORM E-RELATED | 22 | 390 | - | - | |
Csa06g00134 | 402 | SMART | PP2C_4 | 60 | 384 | IPR001932 | - | |
Csa06g00134 | 402 | Pfam | Protein phosphatase 2C | 72 | 378 | IPR001932 | - | |
Csa06g00134 | 402 | ProSitePatterns | PPM-type phosphatase domain signature. | 108 | 116 | IPR000222 | GO:0043169 | |
Csa06g00134 | 402 | SUPERFAMILY | PP2C-like | 71 | 388 | IPR036457 | - | |
Csa06g00134 | 402 | Gene3D | - | 60 | 395 | IPR036457 | - | |
Csa06g00134 | 402 | MobiDBLite | consensus disorder prediction | 14 | 34 | - | - | |
Csa06g00134 | 402 | PANTHER | PROTEIN PHOSPHATASE 2C 3 | 22 | 390 | - | - | |
Csa06g00134 | 402 | SMART | PP2C_SIG_2 | 86 | 386 | IPR001932 | - | |
Csa06g00134 | 402 | CDD | PP2Cc | 72 | 386 | IPR001932 | - | |
Csa06g00134 | 402 | ProSiteProfiles | PPM-type phosphatase domain profile. | 72 | 386 | IPR001932 | - | |
Csa06g00134 | 402 | MobiDBLite | consensus disorder prediction | 40 | 60 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02450 | Csa-Chr1:21706055 | Csa06g00134 | Csa-Chr6:877776 | 1.01E-105 | dispersed | |
Csa06g00134 | Csa-Chr6:877776 | Csa06g01923 | Csa-Chr6:17350468 | 7.68E-41 | dispersed | |
Csa01g02859 | Csa-Chr1:25154173 | Csa06g00134 | Csa-Chr6:877776 | 2.49E-63 | transposed | |
Csa02g01173 | Csa-Chr2:11431223 | Csa06g00134 | Csa-Chr6:877776 | 1.31E-20 | transposed | |
Csa03g01653 | Csa-Chr3:12341428 | Csa06g00134 | Csa-Chr6:877776 | 7.09E-72 | transposed | |
Csa03g02590 | Csa-Chr3:24441967 | Csa06g00134 | Csa-Chr6:877776 | 9.75E-22 | transposed | |
Csa03g04066 | Csa-Chr3:35595281 | Csa06g00134 | Csa-Chr6:877776 | 7.87E-61 | transposed | |
Csa06g02025 | Csa-Chr6:18188911 | Csa06g00134 | Csa-Chr6:877776 | 2.73E-57 | transposed | |
Csa01g02461 | Csa-Chr1:21806317 | Csa06g00134 | Csa-Chr6:877776 | 1.75E-52 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00134 | K14497 | - | csv:101220425 | 670.618 |