Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00159 ATGTTAAGTACATTGATTCTTCAGTCCAAGTTGGCAGCTATTATGGCATCTTTCATTATTCAGAAACCTCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTCATGTTGAAACATCAGAAGGACTATGTGGACATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAGCTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGAGGATGATGCACACTCCAAAGGATGGCTTGGTCCTAGGACTGATGATTCTAATGCTGATACCATTGCGCACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTAAACCAAGTAAATAAACCACGTTCCGCCAATACCCCTGAGTATAATAACACAGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTAGATGATGAAACTCGTGCACTTCAGGTTGAGTTAACTAGTCTTCTTGACGCAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCCGTTGAAGCTACGAAGAATGTCGAGCTTGGTAATAAAGAACTTACCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACTTTTTCAATTCTCTTTCTTGATTGGTACAGTTGA 873 40.78 MLSTLILQSKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVAAFIKACQEQLDILKNSINEDDAHSKGWLGPRTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANTPEYNNTELREPDNFEHQPVRAQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS* 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1047007 1050453 + CsaV3_6G001590.1 Csa06g00159 531786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00159 290 Gene3D - 193 287 - -
Csa06g00159 290 PANTHER SYNTAXIN-18 13 290 - -
Csa06g00159 290 Pfam SNARE-complex protein Syntaxin-18 N-terminus 10 68 IPR019529 -
Csa06g00159 290 PANTHER SYNTAXIN-18 13 290 - -
Csa06g00159 290 SUPERFAMILY t-snare proteins 43 254 IPR010989 GO:0016020|GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00159 K08492 - csv:101207161 541.962