Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00183 ATGCTCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTTGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAAGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTTCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGTGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTAAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTCTTTGCTGCAAGTTCAAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG 570 41.4 MLSEMTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSRYKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE* 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1227801 1230200 + CsaV3_6G001830.1 Csa06g00183 531810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00183 189 PANTHER UNCHARACTERIZED 5 188 IPR010492 -
Csa06g00183 189 SUPERFAMILY PriA/YqbF domain 3 70 - -
Csa06g00183 189 CDD GINS_A_psf3 69 171 - -
Csa06g00183 189 Pfam GINS complex protein 49 152 IPR021151 -
Csa06g00183 189 Gene3D - 1 171 IPR038437 -
Csa06g00183 189 SUPERFAMILY GINS helical bundle-like 69 170 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00183 K10734 - csv:101203869 372.089