Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00217 ATGGCTGATTTAGGATTCAAAACAGTTTTGATTTTGACTTTGGGTTTCTTTTTGCTCTTTTTGGGCAATGTATCAGGTCAACTTTCTACTGGCTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAATCCTCTGTTCGTTCTGCTGTCTCAAGTGAAGCTCGCATGGGAGCTTCAATTCTTCGCTTGTTTTTTCATGATTGTTTCGTCAATGGTTGCGACGGGTCAATTTTGTTAGACGACACGTCGAGCTTTACCGGAGAGAAAAATGCTAATCCTAACAGAAATTCTGCTAGAGGCTTTGATGTTATTGATAACATCAAAACTGCTGTTGAAAAAGCTTGTCCTGGTGTTGTTTCTTGCGCTGATATTCTCGCTATTGCTGCTCGTGATTCTGTCGTTCTCCTAGGAGGGCCGAGTTGGAATGTGAAGTTGGGAAGAAGAGACTCTACAACTGCGAGCCAATCCCAAGCGAACAATGACATCCCCGGGCCAACTTCAAGTCTTAGCCAACTCAGCTCTAGATTTAGTGCTCTTGGACTTTCCAGTACTGACTTGGTCGCTCTTTCAGGCGGACACACAATCGGACAAGCGCGTTGCACAACATTTAGAAGCAGAATATACAGTAACAGCTCAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAACTGCCCCAACACCTCAGGAACTGGAGACAATAATTTGGCTCCTTTGGATTTTACTCCAACCTCATTTGATAACAACTACTACAAGAATCTTGTTCAAAACAAGGGCCTCTTACAATCTGATCAAGTTCTCTTCAACGGCGGATCTACCGATTCCGTTGTTCAAAATTACGCAAATGCTCCTGCCCGTTTCTTATCTGATTTTGCTGCCGCCATGGTCAAGATGGGAGACATCGCTCCTCTTACTGGCTCCAATGGTCAAATTAGGAAGAACTGCAGGATGGTTAATTAA 969 43.24 MADLGFKTVLILTLGFFLLFLGNVSGQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDSTTASQSQANNDIPGPTSSLSQLSSRFSALGLSSTDLVALSGGHTIGQARCTTFRSRIYSNSSNIESSFARTRQSNCPNTSGTGDNNLAPLDFTPTSFDNNYYKNLVQNKGLLQSDQVLFNGGSTDSVVQNYANAPARFLSDFAAAMVKMGDIAPLTGSNGQIRKNCRMVN* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1493533 1495242 + CsaV3_6G002170.1 Csa06g00217 531844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00217 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Csa06g00217 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Csa06g00217 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Csa06g00217 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 Gene3D Peroxidase, domain 2 165 301 - -
Csa06g00217 322 Gene3D - 31 322 - -
Csa06g00217 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PANTHER PEROXIDASE 8 322 - -
Csa06g00217 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 PANTHER PEROXIDASE 72-RELATED 8 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00217 322 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00543 Csa-Chr4:3606838 Csa06g00217 Csa-Chr6:1493533 1.54E-112 dispersed
Csa05g00971 Csa-Chr5:8173590 Csa06g00217 Csa-Chr6:1493533 1.80E-129 dispersed
Csa05g02547 Csa-Chr5:26900165 Csa06g00217 Csa-Chr6:1493533 1.59E-99 dispersed
Csa06g00217 Csa-Chr6:1493533 Csa06g01604 Csa-Chr6:13801029 7.63E-139 dispersed
Csa06g00217 Csa-Chr6:1493533 Csa06g02923 Csa-Chr6:25335342 1.68E-114 transposed
Csa06g00217 Csa-Chr6:1493533 Csa06g03285 Csa-Chr6:27565675 3.01E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00217 K00430 - csv:101218447 609.372