Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00361 | ATGGCTACTGATCAGCTCCACCTTCTCACTGTTCTTGATCGTGCAAAGACCCAATTCTACCACTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGATCTCTTCTGCATATCTCTCGTCACCAAACTCCTCGGCCGCATTTACTACACCGTCGAAGGCTCCCCCCGTCCCGGAACCCTCCCTTCCGTCGTCGCCGCAGCAGTCAACGGCGTCGCACTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGTGACAAGCTCGGCCGCAAGCGCGTCTACGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACTTCCGTCATCACCACACTCTGTTTTTTCCGATTCTGGCTCGGCTTCGGCATCGGCGGCGATTACCCTTTATCTGCCACCATAATGGCAGAATACTCCAATAAGAAAACACGAGGGGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTCTCGCCGGCGGCACGGTAGCGATTGTAATTTCGTTAATTTTCAAGACCCTTTTCAAAGCTCCGCCGTACTCGGTGGACGCCGTGAAATCGACGGTGCCAGAAGCGGATTACGTATGGAGGATTATATTAATGTTGGGGTCCTTGCCGGCGCTTTTAACTTACTATTGGCGGATGAAAATGCCGGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGCCGACATGTCGAAAGTGTTAAATGTGGAAATTGGTCAAAATGTGGTAAATGAGACTCAAAGTAACACAAATGCAAACTCAAACTTTGGGTTTTTTAGTAAGAAATTTCTGGAGAGACATGGGATTCATCTTTTAGGGACTGCCACTACTTGGTTTTTAATCGATGTAGCTTATTATAGCCAAAATTTATTCCAAAAGGACATTTTCAGCGCTGTGGGTTGGTTGCCACCGGCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAGATCGCCAAGGCTCAGACACTCATTGCCCTTTGTGGGACGGTTCCTGGCTATTGGGCCACGGTTCTTCTCATAGATCGGGTTGGTCGGTTTTTTATTCAAGTGCTTGGATTTTTCTTCATGACTGTTTTTATGTTTGCGCTTGCAATTCCTTACCGTCATTGGACCGGGAACCATGTTGGGTTTGTTGTGATGTATGGGCTTACTTTTTTCTTTGCTAATTTTGGACCTAATAGTACTACTTTTGTTGTCCCTGCTGAGATTTTTCCAGCTCGGTTTCGGTCAACTTGTCATGGGATATCAGCTGCAGCTGGGAAAGCTGGGGCTATTGTTGGAGCTTTTGGGTTCTTGTATGCTGCTCAGAGTCAAGATCCATCCAAGACCGAACCTGGTTATCCGGCTGGGATCGGAATGAGGAATTCTTTGATCATTTTGGGAATTTTCAATGTGTTTGGGTTACTTTTTAGTTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTAGAAGAAATGTCAAAAGAGAATGAAGTTGGAGAGGATGGAGAATGTAAAGTGCAAGCTGCTAGATCAGTTGAACAGTTTTAG | 1608 | 47.95 | MATDQLHLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTVEGSPRPGTLPSVVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTSVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISLIFKTLFKAPPYSVDAVKSTVPEADYVWRIILMLGSLPALLTYYWRMKMPETPRYTALVANDNKKACADMSKVLNVEIGQNVVNETQSNTNANSNFGFFSKKFLERHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPPAKTMSALEEVFKIAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVLGFFFMTVFMFALAIPYRHWTGNHVGFVVMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDPSKTEPGYPAGIGMRNSLIILGIFNVFGLLFSFLVPESKGKSLEEMSKENEVGEDGECKVQAARSVEQF* | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2938148 | 2939920 | - | CsaV3_6G003610.1 | Csa06g00361 | 531988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00361 | 535 | Pfam | Sugar (and other) transporter | 26 | 514 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Csa06g00361 | 535 | CDD | MFS_PhT | 25 | 505 | - | - | |
Csa06g00361 | 535 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 506 | IPR020846 | GO:0022857 | |
Csa06g00361 | 535 | PANTHER | PHOSPHATE TRANSPORTER, PUTATIVE-RELATED | 3 | 523 | - | - | |
Csa06g00361 | 535 | Gene3D | MFS general substrate transporter like domains | 20 | 528 | IPR036259 | - | |
Csa06g00361 | 535 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 3 | 523 | - | - | |
Csa06g00361 | 535 | SUPERFAMILY | MFS general substrate transporter | 12 | 515 | IPR036259 | - | |
Csa06g00361 | 535 | TIGRFAM | 2A0109: phosphate:H+ symporter | 12 | 515 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g01213 | Csa-Chr3:9360966 | Csa06g00361 | Csa-Chr6:2938148 | 0 | dispersed | |
Csa03g01215 | Csa-Chr3:9373442 | Csa06g00361 | Csa-Chr6:2938148 | 0 | dispersed | |
Csa03g02186 | Csa-Chr3:19003078 | Csa06g00361 | Csa-Chr6:2938148 | 1.28E-126 | dispersed | |
Csa03g02187 | Csa-Chr3:19010288 | Csa06g00361 | Csa-Chr6:2938148 | 3.57E-80 | dispersed | |
Csa03g02235 | Csa-Chr3:19645056 | Csa06g00361 | Csa-Chr6:2938148 | 6.32E-45 | dispersed | |
Csa04g02735 | Csa-Chr4:26288388 | Csa06g00361 | Csa-Chr6:2938148 | 6.79E-173 | dispersed | |
Csa06g00361 | Csa-Chr6:2938148 | Csa06g03608 | Csa-Chr6:29132768 | 8.26E-13 | dispersed | |
Csa06g00361 | Csa-Chr6:2938148 | Csa02g01063 | Csa-Chr2:10325177 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00361 | K08176 | - | csv:101205342 | 1055.82 |