Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00409 | ATGGCGTCTTCTTCTTCTTCTTCTTCTTTCTCTGATCATCGACTTTTCTTCTCCTTCTTAGCCTTCACCCTCTCTGCATTCATCTTCTTCCTCGCTCATAAACGCACCTCTAAGCCACGTCTCAACCTCCCCCCAGGACCCCGTGGCTGGCCCATCGTCGGAAACCTCTTCCAGGTCGCTCGCACCGGAAAGCATTTCTTCGAATACATTGAAGACATACGCCACAATTACGGCCCAATCTTGACTCTTCAGATGGGCGCTCGCACCATGATCATCTTGTCCGGACCCGACCTCATCCACGAAGCCTTAATCAAACGCGGCCCAGCTTTCGCCAGCCGTCCGCCCGAAAATCCAACTCGAATCGTCTTCAGCAACAACAAATTCTCCGTTAACGCCGCCCTCTACGGCGGTGTCTGGCGCTCACTCCGTCGTAATATGGTTGAGAATATGCTCTCTTCCACTCGCTTGAAGGAGTTTCGCGATGTTAGAAAGAAGGCCATGGATAAGCTCGTTCAACGCATTCGAACCGACGCTGAGGCGAACGGCGGCGCCGTTTGGGTGTTGAAAAACGCTCGATTCGCTGTGTTCTGTATTCTCTTAGCAATGTGTTTCGGATTAGAAATGGATGAGGAATCGGTTGAGCAAATGGATCAAGTTCTTAAAACTGTTCTGATCACCGTCGATCCCAGAATCGACGATTTTCTCCCGATTTTGAGGCCGTTCTTTGCTAAACAGAGGAAACGCGCGATGGAAGTAAGAAGAGAGCAAATCGAATTCGTTGTCCAGTTCATCAATCGAAGAAAAAAAGCACTTCAAAATCCAGGTTCAGACAATAAAGCAACTTCATTTTCGTACCTCGATACACTCTTCGATCTCAAAGTGGACGGCCGGAAATCTACCCCAACCGACGCCGAACTAGTCACTCTCTGTTCCGAATTCCTCAACGGAGGCGTGGACACGACGGCAACCGCCATCGAATGGGGAATCGCAGAGCTAATCACAAACCCTAACGTTCAGAAAAAGCTTTACGAAGAAATCAAGCAATTAGTAGGCGACAGAAAAGTAGATGAATCTGATGTTCAGAAATTGCCTTATCTTCAAGCGGTTGTGAAGGAATTGCTGAGAAAGCATCCTCCGACGTACTTCTCGCTGACACACTCAGGGATCGAGGCGTCTAAACTGGGGGGATACGATATTCCGATGGAGGCGAGTGTGGAGGTTTATTTAGCCGGAATGAGTAACGATCCGAAAGTGTGGAAGAATCCGGAGAAATTTGAACCGGAGAGATTCATGTCGGGGGAGGAAGAGGTGGATATGACAGGGATTAAAGGAATGAAAATGATTCCGTTCGGAGTTGGAAGGAGAATTTGCCCGGGTTTGGGAATGGCGACGATTCATGTTCATCTGATGATGGCGAAGTTGGTTCAGGAATTTGAATGGAGTTCGTATCCGCCGAATAGTGAATTGGATTTTACGAAGAAGTATGAATTTACTGTTGTGATGAAGAATTCTCTTAGAGCCATTGCCACAACCAGAGCTTGA | 1542 | 47.99 | MASSSSSSSFSDHRLFFSFLAFTLSAFIFFLAHKRTSKPRLNLPPGPRGWPIVGNLFQVARTGKHFFEYIEDIRHNYGPILTLQMGARTMIILSGPDLIHEALIKRGPAFASRPPENPTRIVFSNNKFSVNAALYGGVWRSLRRNMVENMLSSTRLKEFRDVRKKAMDKLVQRIRTDAEANGGAVWVLKNARFAVFCILLAMCFGLEMDEESVEQMDQVLKTVLITVDPRIDDFLPILRPFFAKQRKRAMEVRREQIEFVVQFINRRKKALQNPGSDNKATSFSYLDTLFDLKVDGRKSTPTDAELVTLCSEFLNGGVDTTATAIEWGIAELITNPNVQKKLYEEIKQLVGDRKVDESDVQKLPYLQAVVKELLRKHPPTYFSLTHSGIEASKLGGYDIPMEASVEVYLAGMSNDPKVWKNPEKFEPERFMSGEEEVDMTGIKGMKMIPFGVGRRICPGLGMATIHVHLMMAKLVQEFEWSSYPPNSELDFTKKYEFTVVMKNSLRAIATTRA* | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3567044 | 3568585 | + | CsaV3_6G004090.1 | Csa06g00409 | 532036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00409 | 513 | Pfam | Cytochrome P450 | 44 | 500 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 8 | 510 | - | - | |
Csa06g00409 | 513 | Gene3D | Cytochrome P450 | 29 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | SUPERFAMILY | Cytochrome P450 | 44 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g00409 | 513 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00409 | 513 | PANTHER | CYTOCHROME P450 77A4 | 8 | 510 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g02744 | Csa-Chr5:28178417 | Csa06g00409 | Csa-Chr6:3567044 | 0 | dispersed | |
Csa06g00409 | Csa-Chr6:3567044 | Csa06g03530 | Csa-Chr6:28747373 | 4.54E-159 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00409 | K21995 | - | csv:101206763 | 1000.73 |