Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00451 ATGGCGTCAGAGCGGCCGCTACTGATTATATCTCCAAGAACACCGAAAACTGTCTCTCACGATCTACAGAAACCGGAGTTGAATCGACCTGGATTGTTCTTCGCCATGGATTCTCGAACCTCAAATGAGAATTCAGCAAGTACCGAACTGGGTTATCGGTCTTTCTCGCGGCGAAGTCAATCGTCGCTGCAATCGAAGACGTCAATTCGTGAAGTGGGTTCTAGTGAATTTGGATCGAGGCCTGTTCGTCATGGGTCACGTGGTGGTGATTCTGAAGTATTCAGCATATCCCAGAAGGAGATCAGTGATGAAGATGCGAGGTTAATTTATATTGACGATCCCGAAAAGACGAACGAGAAGTTTGAATTTGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTCACTTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATATATACTTCCTTGTTATTGCGGTTCTCAATCAACTTCCCCAGCTTGCTGTTTTTGGTCGGGGAGTTTCCATTTTGCCTTTAGCTTTTGTGCTGCTAGTTACTGCTGTTAAAGATGCATACGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTCTTGGTAGATGGTCAGTTTCAACTGAAGAAATGGAAGAATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGATACCATTCCGTGTGATATGGTGCTTCTTTCTACCAGTGATTCCACAGGGGTTGCATATGTTCAAACTCTGAATTTGGATGGGGAATCAAATTTAAAAACCAGGTATGCCAAACAGGAAACAATGTCAAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTCTCTCTTGGACCTCCAAACATAGTTCTTCGTGGCTGTGACCTTAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGGCGTGAGACAAAAGCCATGCTTAACAGTTCTGGAGCTCCATCAAAAAGAAGTCGACTTGAGACTCGTATGAATGTGGAGATTGTTATGCTCTCTTTCTTTCTGGTTGCTTTGTGTACTGTTGTCTGTGTTTTGGCTGCTGTTTGGTTCATCAGAAACAGGGAAAATTTGGACATTTTACCTTATTTCAGAAATAAGGACTTCTCAAAGACCCCACCTGAAACTTATAATTACTATGGATGGGGATTGGAGGCCTTTTTTGCGTTCCTCATGTCAGTCATTGTGTTCCAGGTCATGATACCCATTTCACTATACATTTCCATGGAGGTTGTTCGTGTTGGCCAGGCTTATTTCATGATCCGAGACACCCAAATGTATGACGAAACATCAAATTCAAGATTTCAGTGTCGGGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACAGGTACCCTTACCGAGAATAAGATGGAATTTCGATGCGCAAGCATCTGGGGGGTTGATTATGGAGGTGAAAGTTCCATTCCTCTCGACGAGCAGATTGGATACTCTGTTCGAGTGAATGGAAAGGTTTTGAGACCGAAGTTGGTTGTCAAAACTGATCCTGAGCTTCTACAGTTTTCAAGAAGTGGAAGGCACACCAGGGATGGGAGATATATTCATGATTTCTTCCTTGCATTAGCTGCTTGCAATACCATTGTTCCTCTCATTACCGAAACTTCTGATCCTTCGGTGCAATTAATTGACTACCAAGGGGAATCTCCAGATGAACAGGCATTGGTTTATGCTGCTGCAGCATATGGTTTTATGCTAATTGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACATAGGTAA 1914 41.8 MASERPLLIISPRTPKTVSHDLQKPELNRPGLFFAMDSRTSNENSASTELGYRSFSRRSQSSLQSKTSIREVGSSEFGSRPVRHGSRGGDSEVFSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFQLKKWKNIRVGEIIKIGANDTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCDLKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIVMLSFFLVALCTVVCVLAAVWFIRNRENLDILPYFRNKDFSKTPPETYNYYGWGLEAFFAFLMSVIVFQVMIPISLYISMEVVRVGQAYFMIRDTQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESSIPLDEQIGYSVRVNGKVLRPKLVVKTDPELLQFSRSGRHTRDGRYIHDFFLALAACNTIVPLITETSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKHR* 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3851908 3853931 - CsaV3_6G004510.1 Csa06g00451 532078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00451 637 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Csa06g00451 637 MobiDBLite consensus disorder prediction 1 25 - -
Csa06g00451 637 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 6 635 - -
Csa06g00451 637 Pfam E1-E2 ATPase 209 451 - -
Csa06g00451 637 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 123 634 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Csa06g00451 637 Pfam Phospholipid-translocating ATPase N-terminal 109 175 IPR032631 -
Csa06g00451 637 MobiDBLite consensus disorder prediction 38 91 - -
Csa06g00451 637 SUPERFAMILY Calcium ATPase, transduction domain A 206 347 IPR008250 -
Csa06g00451 637 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 425 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Csa06g00451 637 Gene3D - 180 350 - -
Csa06g00451 637 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 6 635 - -
Csa06g00451 637 MobiDBLite consensus disorder prediction 38 74 - -
Csa06g00451 637 SUPERFAMILY HAD-like 480 521 IPR036412 -
Csa06g00451 637 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 487 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00451 Csa-Chr6:3851908 Csa07g02379 Csa-Chr7:21930097 3.51E-88 dispersed
Csa06g00451 Csa-Chr6:3851908 Csa01g00638 Csa-Chr1:4052892 3.44E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00451 K14802 - csv:101212953 1239.56