Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00633 ATGGGTGGCGGAGGTGAAGGAACGACGCTGGAATTCACTCCGACGTGGGTTGTAGCCGCCGTATGTACTGTCATCGTTGCCATTTCTCTCGCCTTAGAGCGCCTTCTTCACTTTCTCGGCAGATACCTCAAAAGCAAGAATCAAAAGCCGCTCAATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTCATTTCACTTCTGCTCACTGTATTTCAAGGCACCATCTCTAAATTGTGTGTTCCTGAGAGTTTGACTGAACATTTACTTCCGTGTGATCTGAAGGATAAACCGAAAGCTGAACATGGTTCGCCCTCTGGTGAATCTGGTTCGTCAACGACGAAGCATTTTCAAACGTTATTTGTTTCGAGTATTTCTGGTACGGCCAGGCGGCTTCTTTCTGAGGGATCTGCTTCACAAGCTGGTTACTGTGCCAAAAAGAATAAGGTGCCATTGCTATCTCTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCACGTGACATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGCCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTATGATACTGAACAAGTTCTAAAACCAAAAGTCACTCATGTCCATCAACATGCTTTTATCAAAGACCACTTTTTGGGCTTTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCATTCATTTCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACGTTACGACTTGGTTTCATTACGACGCACTGCAGGGGAAATCCAAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGACTTCAAGCATGTTGTTGGTATCAGTTGGTATCTTTGGATATTCGTGGTTGTCTTCTTGTTCCTTAATGTCAGTGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTTGCTGTGGGAACGAAGCTGGAACATGTGATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCACATAGCAATCGAAGGTGATCTAGTAGTCCAACCGTCTGATGATCACTTTTGGTTCCAACGTCCCCGTATTGTTCTCTTCTTGATCCACTTTATACTTTTCCAAAACGCTTTTGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGATTTGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATCATTGGGGTGTTTGTTCAGGTTCTTTGCAGCTACAGCACCCTTCCGCTCTACGCCATTGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGGCTAGTTGGCTGGGCTCAGAAGGTGAAGAAAAGAAAGGGACTTAGAGCAGCTGCTGATGGCTCCAGTCAAGGAGTCAAGGAAGGTGGTTCAACTGTGGGGATTCAGTTGGGAAATGTTATGCGCAAGGCTTCTGCACCTCAAGAAATTAAGCCTGATGACTCCAAATCAAATGATATTCCTTAG 1551 43.07 MGGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGRYLKSKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKLCVPESLTEHLLPCDLKDKPKAEHGSPSGESGSSTTKHFQTLFVSSISGTARRLLSEGSASQAGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGFGKDSALLGWLHSFLKQFYASVTKSDYATLRLGFITTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVSGWHTYFWIAFIPFVLLLAVGTKLEHVITQLAHEVAEKHIAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGVKEGGSTVGIQLGNVMRKASAPQEIKPDDSKSNDIP* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5305552 5311196 + CsaV3_6G006330.1 Csa06g00633 532260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00633 516 Pfam Mlo family 8 476 IPR004326 GO:0006952|GO:0016021
Csa06g00633 516 MobiDBLite consensus disorder prediction 502 516 - -
Csa06g00633 516 MobiDBLite consensus disorder prediction 493 516 - -
Csa06g00633 516 PANTHER MLO-LIKE PROTEIN 1 2 504 IPR004326 GO:0006952|GO:0016021
Csa06g00633 516 PANTHER MLO-LIKE PROTEIN 2 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01639 Csa-Chr2:15516959 Csa06g00633 Csa-Chr6:5305552 2.90E-148 dispersed
Csa05g02923 Csa-Chr5:29673306 Csa06g00633 Csa-Chr6:5305552 1.05E-121 dispersed
Csa06g00633 Csa-Chr6:5305552 Csa06g01952 Csa-Chr6:17630672 3.02E-138 dispersed
Csa06g03661 Csa-Chr6:29433070 Csa06g00633 Csa-Chr6:5305552 5.50E-115 dispersed
Csa06g00633 Csa-Chr6:5305552 Csa06g01679 Csa-Chr6:14713131 4.22E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00633 K08472 - csv:101211868 1011.13