Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00633 ATGGGTGGCGGAGGTGAAGGAACGACGCTGGAATTCACTCCGACGTGGGTTGTAGCCGCCGTATGTACTGTCATCGTTGCCATTTCTCTCGCCTTAGAGCGCCTTCTTCACTTTCTCGGCAGATACCTCAAAAGCAAGAATCAAAAGCCGCTCAATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTCATTTCACTTCTGCTCACTGTATTTCAAGGCACCATCTCTAAATTGTGTGTTCCTGAGAGTTTGACTGAACATTTACTTCCGTGTGATCTGAAGGATAAACCGAAAGCTGAACATGGTTCGCCCTCTGGTGAATCTGGTTCGTCAACGACGAAGCATTTTCAAACGTTATTTGTTTCGAGTATTTCTGGTACGGCCAGGCGGCTTCTTTCTGAGGGATCTGCTTCACAAGCTGGTTACTGTGCCAAAAAGAATAAGGTGCCATTGCTATCTCTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCACGTGACATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGCCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTATGATACTGAACAAGTTCTAAAACCAAAAGTCACTCATGTCCATCAACATGCTTTTATCAAAGACCACTTTTTGGGCTTTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCATTCATTTCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACGTTACGACTTGGTTTCATTACGACGCACTGCAGGGGAAATCCAAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGACTTCAAGCATGTTGTTGGTATCAGTTGGTATCTTTGGATATTCGTGGTTGTCTTCTTGTTCCTTAATGTCAGTGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTTGCTGTGGGAACGAAGCTGGAACATGTGATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCACATAGCAATCGAAGGTGATCTAGTAGTCCAACCGTCTGATGATCACTTTTGGTTCCAACGTCCCCGTATTGTTCTCTTCTTGATCCACTTTATACTTTTCCAAAACGCTTTTGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGATTTGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATCATTGGGGTGTTTGTTCAGGTTCTTTGCAGCTACAGCACCCTTCCGCTCTACGCCATTGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGGCTAGTTGGCTGGGCTCAGAAGGTGAAGAAAAGAAAGGGACTTAGAGCAGCTGCTGATGGCTCCAGTCAAGGAGTCAAGGAAGGTGGTTCAACTGTGGGGATTCAGTTGGGAAATGTTATGCGCAAGGCTTCTGCACCTCAAGAAATTAAGCCTGATGACTCCAAATCAAATGATATTCCTTAG 1551 43.07 MGGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGRYLKSKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKLCVPESLTEHLLPCDLKDKPKAEHGSPSGESGSSTTKHFQTLFVSSISGTARRLLSEGSASQAGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGFGKDSALLGWLHSFLKQFYASVTKSDYATLRLGFITTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVSGWHTYFWIAFIPFVLLLAVGTKLEHVITQLAHEVAEKHIAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGVKEGGSTVGIQLGNVMRKASAPQEIKPDDSKSNDIP* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5305552 5311196 + CsaV3_6G006330.1 Csa06g00633 532260

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00633 516 Pfam Mlo family 8 476 IPR004326 GO:0006952|GO:0016021
Csa06g00633 516 MobiDBLite consensus disorder prediction 502 516 - -
Csa06g00633 516 MobiDBLite consensus disorder prediction 493 516 - -
Csa06g00633 516 PANTHER MLO-LIKE PROTEIN 1 2 504 IPR004326 GO:0006952|GO:0016021
Csa06g00633 516 PANTHER MLO-LIKE PROTEIN 2 504 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00633 K08472 MLO; mlo protein - csv:101211868 1011.13
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01639 Csa-Chr2:15516959 Csa06g00633 Csa-Chr6:5305552 2.90E-148 dispersed
Csa05g02923 Csa-Chr5:29673306 Csa06g00633 Csa-Chr6:5305552 1.05E-121 dispersed
Csa06g00633 Csa-Chr6:5305552 Csa06g01952 Csa-Chr6:17630672 3.02E-138 dispersed
Csa06g03661 Csa-Chr6:29433070 Csa06g00633 Csa-Chr6:5305552 5.50E-115 dispersed
Csa06g00633 Csa-Chr6:5305552 Csa06g01679 Csa-Chr6:14713131 4.22E-131 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa05g02923 . 3 531 MLO family AT5G53760 71.6 4.7e-218 754.2
Csa04g02353 . 5 552 MLO family AT5G53760 69.2 1.3e-215 746.1
Csa01g01298 CCT,ECH 10 467 MLO family AT3G45290 55.2 9.5e-138 487.3
Csa05g02923 . 3 531 MLO family AT1G26700 70.1 2.1e-210 728.8
Csa04g02353 . 1 532 MLO family AT1G26700 67.9 9.5e-208 719.9
Csa01g01295 . 8 510 MLO family AT2G39200 65.8 1.3e-191 666.4
Csa05g02821 . 7 533 MLO family AT2G39200 64.1 1.7e-191 666.0
Csa06g01679 CCT,ECH 8 504 MLO family AT2G39200 66.7 1.0e-188 656.8
Csa06g01679 CCT,ECH 8 415 MLO family AT1G61560 66.9 1.9e-160 562.4
Csa01g01295 . 1 416 MLO family AT1G61560 67.2 4.0e-158 554.7
Csa05g02821 . 7 408 MLO family AT1G61560 65.7 2.9e-153 538.5
Csa06g03404 . 28 420 MLO family AT1G61560 52.5 2.0e-117 419.5
Csa03g00015 . 27 418 MLO family AT1G61560 51.2 3.3e-112 402.1
Csa06g03404 . 11 488 MLO family AT2G17430 62.7 1.7e-172 602.8
Csa03g00015 . 6 484 MLO family AT2G17430 61.0 2.5e-160 562.4
Csa06g01952 . 2 479 MLO family AT2G17430 58.0 6.1e-151 531.2
Csa06g03404 . 28 558 MLO family AT2G17480 63.6 3.4e-195 678.3
Csa03g00015 . 5 566 MLO family AT2G17480 57.9 2.3e-175 612.5
Csa06g01952 . 12 464 MLO family AT2G17480 59.7 4.8e-149 525.0
Csa06g01679 CCT,ECH 8 462 MLO family AT2G17480 51.2 1.3e-125 447.2
Csa06g01952 . 9 380 MLO family AT1G42560 60.1 1.0e-123 440.3
Csa06g03404 . 28 384 MLO family AT1G42560 58.4 5.1e-120 427.9
Csa03g00015 . 27 383 MLO family AT1G42560 55.5 2.7e-113 405.6
Csa01g01295 . 6 381 MLO family AT1G42560 50.1 4.4e-95 345.1
Csa06g00633 . 6 419 MLO family AT4G24250 53.5 1.8e-115 412.9
Csa02g01639 . 17 434 MLO family AT4G24250 51.1 1.9e-109 392.9
Csa06g03404 . 9 385 MLO family AT5G65970 65.8 1.4e-143 506.5
Csa03g00015 . 6 383 MLO family AT5G65970 65.2 6.0e-142 501.1
Csa06g01952 . 5 380 MLO family AT5G65970 57.3 1.8e-117 419.9
Csa06g01679 CCT,ECH 2 380 MLO family AT5G65970 51.2 7.0e-106 381.3
Csa01g01295 . 2 381 MLO family AT5G65970 50.8 1.6e-102 370.2
Csa06g01952 . 2 472 MLO family AT2G33670 63.8 1.2e-169 593.2
Csa06g03404 . 28 490 MLO family AT2G33670 60.0 3.4e-156 548.5
Csa03g00015 . 18 466 MLO family AT2G33670 57.6 1.2e-140 496.9
Csa05g02821 . 64 540 MLO family AT1G11310 62.7 3.1e-168 588.6
Csa01g01295 . 63 506 MLO family AT1G11310 65.3 3.5e-164 575.1
Csa06g01679 CCT,ECH 63 519 MLO family AT1G11310 63.2 1.9e-162 569.3
Csa06g00633 . 5 509 MLO family AT2G44110 58.4 3.3e-167 585.1
Csa06g00633 . 1 485 MLO family AT4G02600 75.3 8.7e-211 729.9
Csa03g01923 . 3 557 MLO family AT1G11000 66.0 5.6e-211 730.7
Csa03g00073 . 1 480 MLO family AT1G11000 52.1 4.4e-131 465.3
Csa06g00633 . 1 485 MLO family AT4G02600 75.3 8.7e-211 729.9
Csa05g02821 . 64 540 MLO family AT1G11310 62.7 3.1e-168 588.6
Csa01g01295 . 63 506 MLO family AT1G11310 65.3 3.5e-164 575.1
Csa06g01679 CCT,ECH 63 519 MLO family AT1G11310 63.2 1.9e-162 569.3
Csa01g01298 CCT,ECH 10 467 MLO family AT3G45290 55.2 9.5e-138 487.3
Csa03g01923 . 3 557 MLO family AT1G11000 66.0 5.6e-211 730.7
Csa03g00073 . 1 480 MLO family AT1G11000 52.1 4.4e-131 465.3
Csa06g01952 . 2 472 MLO family AT2G33670 63.8 1.2e-169 593.2
Csa06g03404 . 28 490 MLO family AT2G33670 60.0 3.4e-156 548.5
Csa03g00015 . 18 466 MLO family AT2G33670 57.6 1.2e-140 496.9
Csa06g01679 CCT,ECH 8 415 MLO family AT1G61560 66.9 1.9e-160 562.4
Csa01g01295 . 1 416 MLO family AT1G61560 67.2 4.0e-158 554.7
Csa05g02821 . 7 408 MLO family AT1G61560 65.7 2.9e-153 538.5
Csa06g03404 . 28 420 MLO family AT1G61560 52.5 2.0e-117 419.5
Csa03g00015 . 27 418 MLO family AT1G61560 51.2 3.3e-112 402.1
Csa06g03404 . 11 488 MLO family AT2G17430 62.7 1.7e-172 602.8
Csa03g00015 . 6 484 MLO family AT2G17430 61.0 2.5e-160 562.4
Csa06g01952 . 2 479 MLO family AT2G17430 58.0 6.1e-151 531.2
Csa06g03404 . 28 558 MLO family AT2G17480 63.6 3.4e-195 678.3
Csa03g00015 . 5 566 MLO family AT2G17480 57.9 2.3e-175 612.5
Csa06g01952 . 12 464 MLO family AT2G17480 59.7 4.8e-149 525.0
Csa06g01679 CCT,ECH 8 462 MLO family AT2G17480 51.2 1.3e-125 447.2
Csa06g01952 . 9 380 MLO family AT1G42560 60.1 1.0e-123 440.3
Csa06g03404 . 28 384 MLO family AT1G42560 58.4 5.1e-120 427.9
Csa03g00015 . 27 383 MLO family AT1G42560 55.5 2.7e-113 405.6
Csa01g01295 . 6 381 MLO family AT1G42560 50.1 4.4e-95 345.1
Csa06g03404 . 9 385 MLO family AT5G65970 65.8 1.4e-143 506.5
Csa03g00015 . 6 383 MLO family AT5G65970 65.2 6.0e-142 501.1
Csa06g01952 . 5 380 MLO family AT5G65970 57.3 1.8e-117 419.9
Csa06g01679 CCT,ECH 2 380 MLO family AT5G65970 51.2 7.0e-106 381.3
Csa01g01295 . 2 381 MLO family AT5G65970 50.8 1.6e-102 370.2
Csa05g02923 . 3 531 MLO family AT5G53760 71.6 4.7e-218 754.2
Csa04g02353 . 5 552 MLO family AT5G53760 69.2 1.3e-215 746.1
Csa01g01295 . 8 510 MLO family AT2G39200 65.8 1.3e-191 666.4
Csa05g02821 . 7 533 MLO family AT2G39200 64.1 1.7e-191 666.0
Csa06g01679 CCT,ECH 8 504 MLO family AT2G39200 66.7 1.0e-188 656.8
Csa06g00633 . 6 419 MLO family AT4G24250 53.5 1.8e-115 412.9
Csa02g01639 . 17 434 MLO family AT4G24250 51.1 1.9e-109 392.9
Csa05g02923 . 3 531 MLO family AT1G26700 70.1 2.1e-210 728.8
Csa04g02353 . 1 532 MLO family AT1G26700 67.9 9.5e-208 719.9
Csa06g00633 . 5 509 MLO family AT2G44110 58.4 3.3e-167 585.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000916 3 4 3 1 3 3 3 2 3 2 4 3 3 3 2 3 3 6 3 2 2 2 1 2 2 2 3 6 5 2 86
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa06g00633 Csa_Chr06 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0