Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g00652 | ATGTACACCGCAGTGCTCCTGGCAGTGATCCCCTTCCTCCTCTGGCTTCTCAAGAATGCAAACCACTTGCTCTACGAAACCGCCCAGTTGGGTTCGAAACGCTTCGCCCTACCGCCCGGCAACCTCGGCTGGCCCTTCATTGGCAATATGTGGTCTTTTCTAAGAGCTTTCAAGTCTCCTTATCCTGATTCTTTCATGGACTCCTTCCTTTCCAGGTATGGAAATACAGGAATGTACAAAGCCTTCATGTTTGGAAGTCCAAGTGTGATTGTAACTTCAGCAGAAGCATGTAAAAGAGTTTTGAATGATGATGAAGCTTTTGGCTCAGGATGGCCTCCTTCCACCATGAAACTCATAGGGGAAAACTCTTTCATTGGCATTTCTAACCAAGAACACAAGCGGCTCCGCCGTATAACCGCTGCTCCGGTCAACGGTTACGACGCTTTGGCCACCTACCTCACTTACATAGAAAAGATTGTGGTTTCTTCCTTGGACAAATGGGGTAATATGGGAGAAATAGAGTTCTTAACAGAGCTCAGAAAGCTTACCTTTAAGATCATTATGTATATATTTCTTAGCTCTGAAAGTGAGACAATAATGGAGGCTTTGGAGAGAGAGTACACGATGCTTAATCTTGGAGTCAGAGCTATGGCCATCAACATTCCTGGTTTTGCTTACTATAAAGCACTCAAGGCACGAAAAAATCTTGAGGCAACATTTGGATCAATTGTGAGAGGGAGAAGGATGGAAAGAGAGAGGAAGGAGAATTCAAAAACAATGAAAAGAGATATGCTGGATGCTTTGCTAGAAGCTGAAGATGAAGATGGAAGAAGGCTAAGTGATGAAGAAATAATTGATGTCTTGATAATGTATTTGAATGCAGGCCATGAATCTTCAGGTCATACTATGATGTGGGCTACCATTTTCTTACAACAACATCCCCATTTTCTTCAAAAGGCCAAGGCCGAGCAAGAAGAGATGATAAAAAAACGACCTGTGGGGCAGAAGGGTTTAACTCTCAAGGAAGTTCGACAAATGCCCTATCTTTCAAAGGTGATCGATGAAACACTACGAGTGGTAACATTCTCACTCACTGTCTTTCGAGAGGCAAAGCATGATGTTAAAATTAGTGGCTATACCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTTAGAAGTGTTCACTTCGATTCTGAAACTTATCCAGACCCGAGAGAATTTAATCCTTCAAGATGGGACGATTTCATACCAAAAGCAGGAAGCTTTCTCCCATTTGGAGCAGGAAGTAGATTGTGTCCCGGAAACGATCTTGCAAAACTTGAAATCTCTGTCTTTCTCCATTATTTTCTCCTCAATTATAAGTTGGAAAGGGTTAATCCAGAAAGTCCAATTAGGTATCTACCACATTCAAAACCTGAAGATAACTGTTTGGGAAGGATCAAAAGACTTGTTTAG | 1455 | 42.13 | MYTAVLLAVIPFLLWLLKNANHLLYETAQLGSKRFALPPGNLGWPFIGNMWSFLRAFKSPYPDSFMDSFLSRYGNTGMYKAFMFGSPSVIVTSAEACKRVLNDDEAFGSGWPPSTMKLIGENSFIGISNQEHKRLRRITAAPVNGYDALATYLTYIEKIVVSSLDKWGNMGEIEFLTELRKLTFKIIMYIFLSSESETIMEALEREYTMLNLGVRAMAINIPGFAYYKALKARKNLEATFGSIVRGRRMERERKENSKTMKRDMLDALLEAEDEDGRRLSDEEIIDVLIMYLNAGHESSGHTMMWATIFLQQHPHFLQKAKAEQEEMIKKRPVGQKGLTLKEVRQMPYLSKVIDETLRVVTFSLTVFREAKHDVKISGYTIPKGWKVLVWFRSVHFDSETYPDPREFNPSRWDDFIPKAGSFLPFGAGSRLCPGNDLAKLEISVFLHYFLLNYKLERVNPESPIRYLPHSKPEDNCLGRIKRLV* | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5421216 | 5427632 | - | CsaV3_6G006520.1 | Csa06g00652 | 532279 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g00652 | 484 | SUPERFAMILY | Cytochrome P450 | 33 | 466 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | Gene3D | Cytochrome P450 | 27 | 483 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g00652 | 484 | PANTHER | CYTOCHROME P450 26 | 12 | 473 | - | - | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 52 | 75 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 285 | 311 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 346 | 362 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 379 | 393 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 395 | 413 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | E-class P450 group IV signature | 432 | 450 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | Pfam | Cytochrome P450 | 38 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | P450 superfamily signature | 294 | 311 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g00652 | 484 | PANTHER | ENT-KAURENOIC ACID OXIDASE 2 | 12 | 473 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g04632 | Csa-Chr3:40248054 | Csa06g00652 | Csa-Chr6:5421216 | 9.69E-165 | dispersed | |
Csa06g03271 | Csa-Chr6:27505791 | Csa06g00652 | Csa-Chr6:5421216 | 6.69E-67 | dispersed | |
Csa06g03781 | Csa-Chr6:30048644 | Csa06g00652 | Csa-Chr6:5421216 | 3.80E-28 | dispersed | |
Csa07g01422 | Csa-Chr7:14443070 | Csa06g00652 | Csa-Chr6:5421216 | 5.79E-73 | dispersed | |
Csa04g00224 | Csa-Chr4:1336755 | Csa06g00652 | Csa-Chr6:5421216 | 6.18E-25 | transposed | |
Csa03g01017 | Csa-Chr3:8181393 | Csa06g00652 | Csa-Chr6:5421216 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g00652 | K04123 | - | csv:101220640 | 975.696 |