Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00689 ATGATGAGAGAGAGAAGAAAGTGTATGATTGTATCCCTTGTGGGCATAACACTGATGAGTTTATGCATTCTTGCGAAAGGTGAAAATACATTACAACCACCAGTTAAGCTAATATGGCATTACTACAAACTCAACACAACTTGTCCAGATGCTGAGGAATACATAAAACATCAGGTCAAATTGTTTTGGCAAGAGGATAAAAGCATTACTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAATGGTTGTGATGGCTCAATTCTTCTTGATGGTCCAAACTCGGAGAAAAATGCACCACAAAACAAAGGCCTCAAAGGGTTTAAAGAAATTGATAAGATCAAAAGTGTACTCGAAGACAGATGTCCGGGTGTTGTTTCTTGTGCAGATATTTTGAACCTGGCCACTAGAGATGCTGCCCATTTGGCAGGTGCGCCATCTTATCCTGTTTATACAGGAAGGAGGGATGGTTTTACAAGCAGTATTGATGCAGTGGATTTGCCATCTCCCTCCATATCATTGCAACAAGGCCTTCAATATTTCGAATCTAAAGGTCTTGATGTTTTGGACATGGCAACATTGCTAGCTGGACATTCAATGGGAGAAACACACTGTCGATACATCAAGGATAGGCTATACAATTTCAATGGCACAAAAAAGGCAGATCCATCAATGAACAAATCACTCTTAAAAGATCTTCGAAATAAATGCCCAAAAAATTCAAAAAAAGATCCAACAGTGAACCTAACACCAAAACCTGAAAACGACTATCAATTCACAGGTCTTTACTACTCGAGAATCCTCTCCAAAAAGGCGGTACTCGGTATCGATCAACAGCTTATTTTTAGTGACGAAACGAAGGAAATCATCCAGGAGTTTGCTCCAAAATCTGGATTTGAAGACTTCCGTCGGTCCTTTGCTTTGTCCATGAGTAGGATGGGAAACATCAAGGTTTTGACCGGAAAAGATGGCGAGATTCGACGAGATTGTCGGAGAAGAAACTAG 1014 40.53 MMRERRKCMIVSLVGITLMSLCILAKGENTLQPPVKLIWHYYKLNTTCPDAEEYIKHQVKLFWQEDKSITAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNKGLKGFKEIDKIKSVLEDRCPGVVSCADILNLATRDAAHLAGAPSYPVYTGRRDGFTSSIDAVDLPSPSISLQQGLQYFESKGLDVLDMATLLAGHSMGETHCRYIKDRLYNFNGTKKADPSMNKSLLKDLRNKCPKNSKKDPTVNLTPKPENDYQFTGLYYSRILSKKAVLGIDQQLIFSDETKEIIQEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRDCRRRN* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5649713 5652097 + CsaV3_6G006890.1 Csa06g00689 532316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00689 337 ProSiteProfiles Plant heme peroxidase family profile. 36 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601|GO:0042744
Csa06g00689 337 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 PANTHER PEROXIDASE 61-RELATED 17 335 - -
Csa06g00689 337 Gene3D - 41 337 - -
Csa06g00689 337 Gene3D Peroxidase, domain 2 171 316 - -
Csa06g00689 337 PANTHER PEROXIDASE 25-RELATED 17 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 Pfam Peroxidase 56 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g00689 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00689 Csa-Chr6:5649713 Csa07g01199 Csa-Chr7:11789238 7.21E-67 dispersed
Csa06g00689 Csa-Chr6:5649713 Csa01g01488 Csa-Chr1:10618560 2.47E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00689 K00430 - csv:101213667 684.485