Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00744 ATGGCCGGGTTGGTCACTGGTTCCCAACACTATCCGCACGTTGTTGATGAGAGTCACCGTGGACCTCCACTCTCGTCGAAAATCTGTCGAGTTTGTGGTGATGAAATAGGACTGAAAGAAGATGGAAAAGTATTTTTGGCATGTCTTGCGTGTAATTTTCCTGTTTGTCGTCCTTGTTATGAATATGAAAGGAGCGAAGGAAACAAGTGTTGTCCACAATGTAACACTCGCTACAAGCGTCACAAAGGTTCACCCAGAGTGATCGGCGACGATGAAGAAGCTGACGATGCTGATGATTTTGAAGATGAATTCCCCATTAAACACAACAAAAACGACGAATTTCAAGCAAAACAGCCTAATCATTCGGAAAACGATGGGTACAATGATCAGAATTGGCATAAGAATGTGCAGAGCTCGTTCTCAGTTGCAGGAAGTGTGAATGGAAAGGACATGGAAGGGGAGAAGGAAGGTGGCTATGGAAGTGTAGAATGGAAAGAGAGAATTGATAAATGGAAAGTAAGACAAGAGAAGAGAGGTTTAGGGAATAAAGAGGATGGAAGTAACAATGATCAAGAAGAAGATGACTACTTATTGGCGGAGGCCCGGCAGCCATTATGGCGGAAACTACCAATATCGTCAAGCAAAATCAGTCCATATCGGATCGTCATTGTTCTCCGTCTCGTAATTCTTGCATTCTTCTTCCGATTTCGGATCCTTACTCCGGCCTACGACGCATTCCCCTTATGGCTGATCTCCGTCATATGCGAAATCTGGTTCGGCTTCTCCTGGATTCTCGATCAGTTCCCCAAATGGGCACCAATCAACCGAGAAACTTACCTCGACCGTCTCTCCATGCGGTTCGAGCGCGAAGGCGAGCCCAATCTTCTCTCACCGGTCGATTTCTTCGTCAGTACAGTGGATCCTCTGAAAGAACCGCCGATCATTACCGCCAACACCGTCCTCTCGATTCTCGCGGTTGATTATCCGGTGGAGAAGGTCAGCTGCTACGTTTCGGATGATGGAGCGTCGATGTTGCTGTTTGATACACTGGCGGAGACGGCGGAGTTTGCTCGGAGGTGGGTGCCGTTTTGTAAGAAGTTTAGTATTGAACCTAGAGCTCCGGAGTTTTACTTCTCGCAGAAGATGGATTACTTGAAGGATAAGGTGTTGCCGAGCTTTGTGAAGGAGAGGAGGGCAATGAAGAGGGAATATGAAGAGTTCAAGGTGAGGATCAATGCGTTGGTGGCGAAGGCTCAGAAGAAACCAGAAGAGGGATGGGTTATGCAAGATGGGACTCCATGGCCTGGAAACCTCACCCGTGATCATCCTGGCATGATACAGGTGTATCTGGGGAGTGAAGGTGCACTTGATGTCGAAGGCAAAGAGTTGCCTCGTCTTGTATATGTTTCTCGTGAGAAACGCCCTGGATATCAACACCACAAGAAAGCCGGTGCTATGAATGCACTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCATTCATCTTGAATTTGGATTGTGATCACTACGTCAACAATAGCAAAGCTGTAAGGGAAGCCATGTGCTTTCTAATGGACCCTCAGCTTGGAAAGAAACTATGCTACGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGCCACGATAGATATGCTAACCGAAATATAGTGTTCTTTGATATCAACATGCGAGGACTAGATGGAATCCAAGGCCCAGTTTATGTTGGCACAGGATGTGTCTTCAACAGACAGGCTTTATATGGATATGAACCACCAGTCTCAGAGAAAAGGCCAAAGATGACATGTGATTGCTGGCCTTCTTGGTGCTGCTGCTGCTGCTGCGGTGGATCAAGGAAATCGAAGTCCAAGAGGAAAGGAGAAAGAGGTTTGCTTGGAGGCTTGTTCAAGAAGAAGAAAATGATGGGGAAGAGTTATGTAAGGAAAGCTCCGGGACCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTACGATGAGTTGGAGAAGTCATCACTCATGTCCCAGAAGAATTTTGAGAAAAGATTCGGGCAGTCACCAGTTTTCATCGCTTCCACCCTTAAGGAAGATGGAGGTCTGCCAGAAGGGACTAATAGCACATCACTCGTTAAAGAAGCCATCCATGTGATAAGCTGTGGTTATGAAGATAAAACAGAATGGGGAAAAGAGGTTCGTGGCCGTGGCCGAGGCCATTGGCACAATGCTTTTATATTCTTTAATTTTAAAACCTCCACGTGA 2262 46.15 MAGLVTGSQHYPHVVDESHRGPPLSSKICRVCGDEIGLKEDGKVFLACLACNFPVCRPCYEYERSEGNKCCPQCNTRYKRHKGSPRVIGDDEEADDADDFEDEFPIKHNKNDEFQAKQPNHSENDGYNDQNWHKNVQSSFSVAGSVNGKDMEGEKEGGYGSVEWKERIDKWKVRQEKRGLGNKEDGSNNDQEEDDYLLAEARQPLWRKLPISSSKISPYRIVIVLRLVILAFFFRFRILTPAYDAFPLWLISVICEIWFGFSWILDQFPKWAPINRETYLDRLSMRFEREGEPNLLSPVDFFVSTVDPLKEPPIITANTVLSILAVDYPVEKVSCYVSDDGASMLLFDTLAETAEFARRWVPFCKKFSIEPRAPEFYFSQKMDYLKDKVLPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNLTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRQALYGYEPPVSEKRPKMTCDCWPSWCCCCCCGGSRKSKSKRKGERGLLGGLFKKKKMMGKSYVRKAPGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLVKEAIHVISCGYEDKTEWGKEVRGRGRGHWHNAFIFFNFKTST* 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6053307 6057079 + CsaV3_6G007440.1 Csa06g00744 532371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00744 753 Coils Coil 397 417 - -
Csa06g00744 753 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 24 114 - -
Csa06g00744 753 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 151 732 - -
Csa06g00744 753 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 151 732 - -
Csa06g00744 753 SUPERFAMILY Nucleotide-diphospho-sugar transferases 312 587 IPR029044 -
Csa06g00744 753 CDD mRING-HC-C4C4_CesA_plant 27 77 - -
Csa06g00744 753 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 404 591 IPR029044 -
Csa06g00744 753 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 24 114 - -
Csa06g00744 753 SUPERFAMILY RING/U-box 22 99 - -
Csa06g00744 753 Pfam Cellulose synthase 299 732 IPR005150 GO:0016020|GO:0016760|GO:0030244
Csa06g00744 753 Pfam Zinc-binding RING-finger 24 95 IPR027934 -
Csa06g00744 753 MobiDBLite consensus disorder prediction 109 130 - -
Csa06g00744 753 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 102 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00744 Csa-Chr6:6053307 Csa07g02016 Csa-Chr7:19667913 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00744 K10999 - csv:101205733 1413.67