Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00745 ATGTTTCTTTTGCAGATAGGTTGGATTTACGGGTCTGTCACTGAGGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAGTCGGTGTACTGCATGCCCCATAGACCAGCGTTCAAGGGATCGGCTCCGATAAATCTTTCGGATCGTTTGCACCAAGTTCTGAGATGGGCTTTAGGTTCTGTTGAAATCTTCCTCAGCCGACACTGCCCGCTGTGGTATGCTTATGGAGGAAAGCTAAAATGGCTTGAGAGGCTTGCTTACATCAACACTATTGTTTACCCTTTTACTTCTATTCCATTACTTGCTTACTGCACAATCCCTGCTGTCTGTCTTCTCACTGGAAAATTCATTATCCCCACATTGACGAACTTGGCTAGTGTCTGGTTCATGGCCTTGTTTATTTCCATCATTGCAACGGCGGTGCTGGAGCTTCGATGGAGTGAAGTGAGCATTGAAGACTTATGGCGTAATGAGCAATTCTGGGTGATTGGTGGTGTCTCTGCACATCTTTTTGCAGTGTTCCAAGGCCTTCTCAAGGTCCTTGGTGGAGTAGACACCAACTTCACAGTTACAGCAAAAGCCGCTGAAGACACCGAGTTCGGAGAGCTCTATCTTTTCAAGTGGACGACTCTTCTTATCCCACCAACCACTCTCATAATCTTGAATATGGTTGGAGTGGTTGCTGGAATTTCAGATGCAATCAACAATGGCTACGGTTCATGGGGTCCTCTATTTGGAAAGCTGTTTTTCGCTTTCTGGGTCATTGTTCATCTCTATCCTTTCCTCAAGGGTCTGATGGGAAAACAAAACAGGACTCCCACCATTGTTGTCCTTTGGTCCGTGCTTCTTGCTTCCATATTTTCACTGGTTTGGGTGCGTATTGATCCCTTCTTGCCCAAGCAAACTGGTCCTGTCCTCAAACAATGTGGAGTTGATTGCTAG 948 45.68 MFLLQIGWIYGSVTEDILTGFKMHCRGWKSVYCMPHRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIIATAVLELRWSEVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGISDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKQTGPVLKQCGVDC* 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6057109 6058158 + CsaV3_6G007450.1 Csa06g00745 532372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00745 315 Pfam Cellulose synthase 5 308 IPR005150 GO:0016020|GO:0016760|GO:0030244
Csa06g00745 315 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 315 - -
Csa06g00745 315 PANTHER CELLULOSE SYNTHASE 5 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00745 Csa-Chr6:6057109 Csa01g02307 Csa-Chr1:20190683 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00745 K10999 - csv:101205733 638.647