Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00755 ATGGATGATAATGGTTTGGTAATAGCTCTCATTGCCCTTTCCATTTGTGCAATCTTTCACATACTTTTGAACTATATTTCCCATCGCAGGCAGCAAAAACTTCCTCCTGGTCCTCTTTCTCTGCCATTTATAGGCAATCCCATTTGGTTTTTCAAACCTCTGTCTCAACTTGAAACCACCCTTCGCCATTACCATTCCAAATATGGCCCAGTTGTGACCCTTCACTTTGGTAACACCCCTTCCATTTTCATAGCCAGCCACTCTGTTTCTCACCATGCTTTGGTCCAAAACGGCGCCATCTTCGCCGATCGTTTCCCCGTCATGGAAACAGTCAAAATCATTACTAGTAACCAGCATAATATCAGCACTGCCTTCTACGGCCCCACATGGCGTGCCCTCCGCCGTAACCTCACGTCTGAGCTTCTCCATCCTTCTCGTTTGAAAGCTCATTCGGGTTCTCGTAAATGGACGTTGGATGTTCTCGTTCATCGCCTCCGCCTAACATCGGCTGCCGAGCCTGTGAAGGTCATAAATCATATTCGTTATGCTATGTATTGTTTAGCTACAGTTATGTGTTTTGGGGAGAGATTCGATGAGAAGTTTATCTATGAAGTACAAGAATCTCAACGTGGGATTTTGTTGAATATCAATAAATTCAATGATCTTAATTTCTGGCCAGCAAGATTGGGGAAGATTTTGTTCAAGAAACGATGGGATGAGATTCGTCAGCTACGTAAACGGCAAGACGATTTGTTGTTACCTTTGATTAACAATGCAAGAAAAAACAGAACAACAATCAAAGATAATGAAGAAACTGGGAAACCAATCCCTTATGTTGATACTCTATTTGATTTAGAAATTGAGGATAACAACAATGAGAAGAAGAAGAGGAAATTAGTAGACGATGAACTCATAACATTATGTTCCGAGTTTCTCGACGCGATTACCGATACAACGGTTGCATCGTTGCAATGGATAATGGCAAATATAGTGAAGTATCCAGAGATACAAGAGAAGTTGTACAAGGAGATAAAAGAAGTGATGGGAAACAAGAAGAAGGGTGAAGAAATAGAAGAGGAAGAATTGGGGAAGATAACATATTTGAAAGCAGTAGTAATGGAAGGACTACGAAGACATCCCCCGGGGCATATGTTGTTGCCACATAAGGTGACAGAGGAGAGTGTTTTGGATCCAGGAGGATACAGGGTGCCGAAAGGAACATCGGTGAACTTTATGGTAGCGGATATAGGTTGGGATGAGAAAGTATGGACAGAACCAATGGCGTTCAAGCCGGAGAGATTCTTGAACGATAAAGTAGAGGGAGGGGTCGAGTTGGAAGTTGATATAACAGGGAGTAAGGAAATAAAGATGATGCCATTTGGGGCAGGGAGGAGAATATGCCCTGGCATTGGATTGGGGTTATTGCATTTGGAGTATTTTGTTGGGAATTTAGTGTGGAATTTCAAGTGGAATGCTGTAGGGGAAGTTGATTTGTGTGAGAAGCAAGAATCTGCCATCATTATGAAATATCCATTGCTTGCTTCTTTGTCGCCAAGAAGCTGA 1563 42.29 MDDNGLVIALIALSICAIFHILLNYISHRRQQKLPPGPLSLPFIGNPIWFFKPLSQLETTLRHYHSKYGPVVTLHFGNTPSIFIASHSVSHHALVQNGAIFADRFPVMETVKIITSNQHNISTAFYGPTWRALRRNLTSELLHPSRLKAHSGSRKWTLDVLVHRLRLTSAAEPVKVINHIRYAMYCLATVMCFGERFDEKFIYEVQESQRGILLNINKFNDLNFWPARLGKILFKKRWDEIRQLRKRQDDLLLPLINNARKNRTTIKDNEETGKPIPYVDTLFDLEIEDNNNEKKKRKLVDDELITLCSEFLDAITDTTVASLQWIMANIVKYPEIQEKLYKEIKEVMGNKKKGEEIEEEELGKITYLKAVVMEGLRRHPPGHMLLPHKVTEESVLDPGGYRVPKGTSVNFMVADIGWDEKVWTEPMAFKPERFLNDKVEGGVELEVDITGSKEIKMMPFGAGRRICPGIGLGLLHLEYFVGNLVWNFKWNAVGEVDLCEKQESAIIMKYPLLASLSPRS* 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6107273 6109396 + CsaV3_6G007550.1 Csa06g00755 532382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00755 520 PANTHER CYTOCHROME P450 7 518 - -
Csa06g00755 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Csa06g00755 520 Gene3D Cytochrome P450 26 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 518 - -
Csa06g00755 520 Pfam Cytochrome P450 35 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00755 520 SUPERFAMILY Cytochrome P450 35 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00085 Csa-Chr5:418230 Csa06g00755 Csa-Chr6:6107273 5.59E-163 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00755 K24184 - csv:101204774 1040.02