Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00756 ATGGAAATGGAAGCCATCACCTATCTTCCATTTCTGATTACTTTCTTGGCTTTGGTTTCCATTTTCTTCATCCAAAAAACCAAGAAAAACCTCCCTCCCTCCCCTCTAGCTCTCCCAATTCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACACTCCACAATCTCTCCCAAAAATACGGTCCAATCTTCACCCTCCGACTCGGCTCCCGCCTTGTCGTCGTCGTCTCCTCCATATCCGCCATTGAAGAATGCTTCACGACAAACGACATTGTTTTCGCCAACCGCCCCGAGTTTGTTTCCGGCAAGTATCTCACCTATGGAAACTCCACACTCGGGGCTGCTCCATACGGCGACCACTGGCGCAATCTAAGACGGTTGAGTGCAACCGAAATATTGTCAACCATACGGTTGAACATGTCAGCGAGAATCCGAAAAGAAGAGATCGGTATTCTGATAAAGAAATTGAATAGAGTTTTGGGTACGGAATTTGGGAAAGTGAAGTTGAAATCGTTGTTTTCGGAATTGACATTTAATATCATAATGAGAATGTTGGCAGGGAAAAGGTATTATGGGGAAGAAGTGAGTGAGTTGGAAGAAGCTAAGAAGTTTAGAGAAATTATGGAGAGGGCGTTTCAATTGGGTTCATACCCAGGGGATTTTTTGCCATTTTTGAAATGGGTTGATTGGCAATATACAAAAAGAGTTGAAAGTCTTGGGAAAGATACGGATTGGTTTTTGCAGAATTTGGTGGATGAACATCGGAGAAATGAAGAAGAAGGGGAAAAGGGAAATACAATGATCAGTCATCTCCTTTGCTTGCAGAAGACTCAACCTGATTATTATACTGATGAAATTATCAAAGGCCTCATTGTTACAATTCTATCAGCAGCAACAGAAACATCATCAGTGACAATAGAGTGGGCAATGTCGAATCTCCTCAACCATCCAGAAGCACTAAAAAAGGTAAAGGATGAACTCGACAAACAAATCGGACAAGATCGTATACTAGATGAAGAAGATATCTCCAATCTACCATATCTCCAGAATGTAATTTCAGAGACACTACGCCTTTATCCACCAGCTCCACTCTTAGCTCCTCATTTATCATCGAGCAGTTGTTCTTTAGGAGGATACCATATTCCTGCTGACACTATGTTAATGGTGAATGCATGGGCTATCCAAAGGGATCCTAAGGTTTGGGAGGACTCGACGAGCTTTAAGCCCGAGAGGTTCGAGAGTGATCATCAGGGTCGAGAAGGAAGCAATAACAATAATAATGGTTATAGCTTCTTGCCATTTGGATTGGGGAGGAGGGCTTGCCCTGGGATGGGGATGGCTAATCGTGTGGTGGGATTGACTTTGGGTTCATTGATACAAAGCTTTGAGTGGAAGAGAGTTAGTGAAAAGGAAATTGATATGACTGAAGGTCAAGGAATTTCTATGCCTAAAGTTGAGCCATTGGAGGCCTTGTGTAGAGCTCGTCCCATCATCAAAAAGCTTGCATTAGATGATTAA 1524 42.91 MEMEAITYLPFLITFLALVSIFFIQKTKKNLPPSPLALPILGHLHLLKHPIHRTLHNLSQKYGPIFTLRLGSRLVVVVSSISAIEECFTTNDIVFANRPEFVSGKYLTYGNSTLGAAPYGDHWRNLRRLSATEILSTIRLNMSARIRKEEIGILIKKLNRVLGTEFGKVKLKSLFSELTFNIIMRMLAGKRYYGEEVSELEEAKKFREIMERAFQLGSYPGDFLPFLKWVDWQYTKRVESLGKDTDWFLQNLVDEHRRNEEEGEKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPEALKKVKDELDKQIGQDRILDEEDISNLPYLQNVISETLRLYPPAPLLAPHLSSSSCSLGGYHIPADTMLMVNAWAIQRDPKVWEDSTSFKPERFESDHQGREGSNNNNNGYSFLPFGLGRRACPGMGMANRVVGLTLGSLIQSFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIIKKLALDD* 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6111799 6113665 - CsaV3_6G007560.1 Csa06g00756 532383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00756 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Csa06g00756 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 503 - -
Csa06g00756 507 SUPERFAMILY Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PANTHER CYTOCHROME P450 4 503 - -
Csa06g00756 507 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 Pfam Cytochrome P450 32 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g00756 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02459 Csa-Chr4:24625790 Csa06g00756 Csa-Chr6:6111799 9.29E-167 dispersed
Csa05g02136 Csa-Chr5:24470410 Csa06g00756 Csa-Chr6:6111799 6.48E-19 dispersed
Csa06g00756 Csa-Chr6:6111799 Csa06g02979 Csa-Chr6:25742453 0 dispersed
Csa06g00754 Csa-Chr6:6103772 Csa06g00756 Csa-Chr6:6111799 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00756 K13260 K25488 csv:101207828 947.962