Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g00817 ATGGCGCGTTTTAAACTCCATCTATTCTCAGCTTCAGTGCCACGATCAGTGACTGCCATGGAACCCTATCGTTCTCACAGAAAATCTCCCATCTCAACCAATTCCACTACCACTCTCCCACTCTACCGCTCTGCTCCTCCTCTTGAAGTCAGGCTTGAAGATTTTGAGCTTTATGCCATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGGTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTTGAAAACCAACATGAAACATCCACAGGCATCTGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTGTATTGCCGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACATCGTTTTCTTTCTGAAGGTCCTGAATCTCAGAAGCAGGTATTTGCGGAGCTTGGTCTCTCATACAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAGGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGCACCAAGTAGTGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTTGTGGCTGGTCGAAGAGTATTCCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCGAAGGCCCTAAGTCTGACGAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATCGGTTGGCCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCGGATATATCAATAAAGGACCTTGACCAAATAGCTAAAAGTTCATTTCCACTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAGAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAACTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAGTAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCAATCCATGGCTCGACATGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGAATAATTCAACATCCTAG 1416 42.44 MARFKLHLFSASVPRSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHGSTCDAGINHPNQYFIDSQKVLQSKNNSTS* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6538114 6546739 + CsaV3_6G008170.1 Csa06g00817 532444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g00817 471 PANTHER DNA PRIMASE LARGE SUBUNIT 20 468 IPR007238 GO:0006269
Csa06g00817 471 Pfam Eukaryotic and archaeal DNA primase, large subunit 191 456 IPR007238 GO:0006269
Csa06g00817 471 PANTHER DNA PRIMASE LARGE SUBUNIT 20 468 - -
Csa06g00817 471 Gene3D - 4 264 - -
Csa06g00817 471 PIRSF DNA_primase_large 11 471 IPR016558 -
Csa06g00817 471 CDD PriL_PriS_Eukaryotic 41 459 IPR016558 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g00817 K02685 - csv:101217274 905.59