Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01109 ATGAGATTCAGGAGGAGAAGACAATGCTTTCCATCTTGCGCTTCCCTCCACAAAGTTGATGAAGATGAAATATATTGGAGACGTAGAAGGGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCTATGTAATTTTACAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGTAGGACTCTTCAATCGTTCCGGCAACAGAAGGAATGATAAGTTTCTTCAATACCCTTTGAGTCCTCTTCAGGAAGAAAGGCTTCAGAGGCTACAAGACAGAATGCATATACCTTTTGATGAGACGTGCGTTGATCATCAAGAAGCTCTGAGAGCATTGTGGAATGCTGCTTATCCAAATATTGAGCTTAAAGGGATGATATCCGAGCAATGGAAAGAAATGGGTTGGCAAGGTCCTAATCCATCCACTGACTTTAGGGGTTGCGGGTTTATTTCCCTTGAAAATTTGCTGTATTTTTCCAGAATGTTTCCGGCATCTTTTCGTAGGTTATTATTGAAGGAAGATGGTAATCGAGCAACTTGGGAATATCCATTTGCTGTTGCTGGCATAAATGTATCATTTATGTTGATTCAAATGTTGGATTTGAACGCCGAAAAACCAAGGAATCTTCCAGGACTAAATTTTGTGAGACTATTAGGAGAAAATGAAGAAGCATTTGACGTATTATACTGTGTAGCTTTCGAGATGATGGATGCTCAATGGCTAGCTATGCATGCTTCCTATATGGAGTTCAATGAGGTTTTGCAAGTAACCAGAACACAGCTAGAAAGGGAGCTATCTTTGGAGGATGTTCATAGAATACAAGACCTACCCGCTTATAATCTGTTGCATCAGTAG 867 40.37 MRFRRRRQCFPSCASLHKVDEDEIYWRRRRGDEELEWSHSSTYVILQLAQCFTNAMVGPRSWIVGLFNRSGNRRNDKFLQYPLSPLQEERLQRLQDRMHIPFDETCVDHQEALRALWNAAYPNIELKGMISEQWKEMGWQGPNPSTDFRGCGFISLENLLYFSRMFPASFRRLLLKEDGNRATWEYPFAVAGINVSFMLIQMLDLNAEKPRNLPGLNFVRLLGENEEAFDVLYCVAFEMMDAQWLAMHASYMEFNEVLQVTRTQLERELSLEDVHRIQDLPAYNLLHQ* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9167747 9172409 + CsaV3_6G013070.1 Csa06g01109 532736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01109 288 PANTHER ENGULFMENT AND CELL MOTILITY 46 287 - -
Csa06g01109 288 PANTHER BNAC05G01970D PROTEIN 46 287 - -
Csa06g01109 288 Pfam ELMO/CED-12 family 93 258 IPR006816 -
Csa06g01109 288 ProSiteProfiles ELMO domain profile. 108 269 IPR006816 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa06g01109 Csa07g00338 CCT
Csa06g01109 Csa07g00338 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01883 Csa-Chr4:18610465 Csa06g01109 Csa-Chr6:9167747 3.85E-97 dispersed
Csa06g00867 Csa-Chr6:6953443 Csa06g01109 Csa-Chr6:9167747 4.25E-100 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01109 K23538 - csv:101222796 599.742