Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01133 ATGTCATTGCCATGGTGGATCTCCCCCACCGCCGTTCCTTTTCCATCTCAGACACAGCTAATTTCTCATCCTTACCAACACCACTCTCACATTCGTCTCAGAAAATTAAGCTCTTCTCCTTCAACTTCCACCGCTCCCAGAGCTGTATTGCTTGACGAAATCGTTCAACTTACCCACAACAAGGTTTTAGTTGCCGCCGGTGTGTCCGCTGCAATTGGGCAGCTCGCCAAGCCTTTCACGTCTGTTGTTTTCTATGGCAGAGAGTTTAACATCAGAACTGCCTTTGAGGCTGGAGGTTTCCCTTCAACCCATTCCTCTGCCGTGGTTGCTGCTGCTACAATCCTTGGTGCTGAGAGGGGTCTTGCCGATTCCATTTTTGGCATAACTGTAGTTTACGCGTCTCTTATTATGTATGATGCTCAGGCAATCAGGAGAGAAGTTGGAAAACATTCTAAAGCCCTCAACAAGCTGTCACAAACAGAGAGACCAATGAACTCATCATTTCCCTACAAAGATGAAGACCTTCGAGTCGATTCCCAACTCGAAAAGAGAATATCATCGTCGCTCAATAGAAATCTTGAGATTGGCAGTCCCATGTTATCCGAGGAATCAACCAAGGCCCTAACAGTACCGAGTCCAGTAAAGCAGGATGTCACAACCTCAAGCGTAGCAAATGATTTGGAAGGAGGATCAAGAATGGAAGCTAGTAGTAGTTGGAAGCCATTTAAAGAGTCAATAGGGCACACTGAGATTGAAGTCGCAGCTGGTGCTTTGTTGGGCTTCACGGTTAGTCTTATTACCAATTCTTTGTTGTGA 816 46.08 MSLPWWISPTAVPFPSQTQLISHPYQHHSHIRLRKLSSSPSTSTAPRAVLLDEIVQLTHNKVLVAAGVSAAIGQLAKPFTSVVFYGREFNIRTAFEAGGFPSTHSSAVVAAATILGAERGLADSIFGITVVYASLIMYDAQAIRREVGKHSKALNKLSQTERPMNSSFPYKDEDLRVDSQLEKRISSSLNRNLEIGSPMLSEESTKALTVPSPVKQDVTTSSVANDLEGGSRMEASSSWKPFKESIGHTEIEVAAGALLGFTVSLITNSLL* 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9410941 9415460 - CsaV3_6G013310.1 Csa06g01133 532760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01133 271 MobiDBLite consensus disorder prediction 204 227 - -
Csa06g01133 271 Pfam Divergent PAP2 family 59 263 IPR003832 -
Csa06g01133 271 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 26 270 - -
Csa06g01133 271 CDD PAP2_like 62 138 - -
Csa06g01133 271 MobiDBLite consensus disorder prediction 204 234 - -
Csa06g01133 271 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 26 270 IPR003832 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02230 Csa-Chr5:25049186 Csa06g01133 Csa-Chr6:9410941 3.18E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01133 - - csv:101219161 502.671