Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa06g01135 | ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGA | 513 | 48.15 | MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV* | 171 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 9427415 | 9432063 | + | CsaV3_6G013330.1 | Csa06g01135 | 532762 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa06g01135 | 170 | CDD | lipocalin_heme-bd-THAP4-like | 24 | 170 | IPR014878 | - | |
| Csa06g01135 | 170 | SUPERFAMILY | Lipocalins | 19 | 170 | IPR012674 | - | |
| Csa06g01135 | 170 | Hamap | Peroxynitrite isomerase. | 16 | 170 | IPR022939 | - | |
| Csa06g01135 | 170 | PANTHER | THAP4 PROTEIN | 9 | 170 | IPR045165 | - | |
| Csa06g01135 | 170 | Pfam | THAP4-like, heme-binding beta-barrel domain | 24 | 169 | IPR014878 | - | |
| Csa06g01135 | 170 | Gene3D | - | 19 | 170 | IPR012674 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa06g01135 | - | K23205 | csv:101218771 | 327.02 |