Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01157 ATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCAGTCGTAGGACGTCAAAGACACTTGAGAGATCTTTGCTGTTTTTCCAACCGTATTCAGTCAAATGGATTATCTTCTCAATATCAGATTGATTTCAATTCACCATTGTCGTCGAAACATTCTTTGTCTTTGGAAGGACTGGAGGATGTCATGGTCGGCTACTTTTTTGGGAAGAAGAGGGCGACAGAAGTTGCTCACTCTGTTTGGAAATGTATTGTCAAAAAAGGGGATACAGTAGTAGATGCTACTTGTGGAAATGGTTATGATACTCTAGCTATGGTCAAGATGGTTGCAGATGAATCTGGTTCTGCACGTGTTTATGCAATGGATGTACAAAATGAGGCTTTAGAAAGTACTTCTGCATTGCTGGATGAATCACTCAGTGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCTAGAGGATTCCCCTGTTAGTCTTGTTGCATTTAACCTAGGGTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACAACATTTCAAGCACTTAAAGCTGCACACAGGATTCTGAAACCTGGAGGGCTTATCAGCCTAGTGGTTTATGTGGGGCATCCTGGTGGAATGGAAGAATTGGAGACTATCGAAAAATTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAGATGTTAAACCGGCCACTAGCTCCAGTGCCTGTATTCTTATTCAAGAGATGA 798 41.48 MLSLKFGSKWVAVATSESVVGRQRHLRDLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLSLEGLEDVMVGYFFGKKRATEVAHSVWKCIVKKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9654187 9657880 + CsaV3_6G013550.1 Csa06g01157 532784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01157 265 Pfam Putative rRNA methylase 123 261 IPR010719 -
Csa06g01157 265 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 231 IPR029063 -
Csa06g01157 265 Gene3D Vaccinia Virus protein VP39 75 265 IPR029063 -
Csa06g01157 265 CDD AdoMet_MTases 95 220 - -
Csa06g01157 265 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 24 265 IPR010719 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01157 - - csv:101214958 506.908