Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01166 ATGTCGCAAAGCAGTGGGCCTGATTTCAATCTACCGGATGAGATTTTGGCGGTGATTCCAACGGATCCATATGATCAGCTCGATCTTGCGCGTAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCTGAAATGATAAGGATGAAGCAAAAGCTTAAAGAGAAGGAAAAAACTATTTATGACCTGCAGGAGAAGATGTCCCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATTGCGCTTGATGATAATACGAGGCTTTCCAGGGAAAGAGATTCTCTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAGAGACAACTTATGCAATCATTAAGTGATGAATCCTCTCAAACTGAAACTGTTGATATTGGAACCTGTGATCAAGCAGTTCCTAAAGCATATACTGACAAGGATGAGGTAACTAATGGGCACGCCACACATTCATTCGGTGGTTCCACAGAGACGAGAAGCACAATAGTTGAAGGAAAGCATATTGGACAAAGATTTTCATCGCCGTATATCACCCCGAGGCTCACTCCATCAGCGACTCCAAAAATTATTTCAACCAGTGTATCCCCCAGAGGGTATTCCACTGTTGCTTCTCCACAGATAATGTCTGGTTCAACTTCTCCAACAAAACACTCATACGATGGACGCATTGCATTATCTCCATGGTACCCATCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGTCTGGTCGCCCTGCACGGGTGGATGGCAAGGAGTTTTTTCGCCTAGCCAGGAGTCGTCTGTCACTAGAGCAGTTTAGTGCCTTCCTTTCGAACATAAAGGAACTCAATGCTCATAAGCAGACTAGAGAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGATTGCTTAACCGCAATGTTCATTAG 999 44.14 MSQSSGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEAEMIRMKQKLKEKEKTIYDLQEKMSHLEHANQEAESRLKIALDDNTRLSRERDSLSMTSKKLGRDLAKLETFKRQLMQSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHATHSFGGSTETRSTIVEGKHIGQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQIMSGSTSPTKHSYDGRIALSPWYPSSQQSSAASSPPRSRQLSGRPARVDGKEFFRLARSRLSLEQFSAFLSNIKELNAHKQTREETLRKAEEIFGTDNKDLFLSFQGLLNRNVH* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9784109 9789386 + CsaV3_6G013640.1 Csa06g01166 532793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01166 332 Coils Coil 42 97 - -
Csa06g01166 332 PANTHER - 3 331 - -
Csa06g01166 332 MobiDBLite consensus disorder prediction 186 264 - -
Csa06g01166 332 Coils Coil 291 311 - -
Csa06g01166 332 MobiDBLite consensus disorder prediction 187 231 - -
Csa06g01166 332 PANTHER - 3 331 - -
Csa06g01166 332 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01399 Csa-Chr3:10466785 Csa06g01166 Csa-Chr6:9784109 6.86E-68 dispersed
Csa06g01166 Csa-Chr6:9784109 Csa06g00556 Csa-Chr6:4769005 1.84E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01166 - - csv:101220153 638.262