Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01245 ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTCCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATTGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAACAGGAGAATCGCACTCAACAAAATGCACTTGCTGCTAAATGA 243 47.74 MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK* 81
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10466855 10467660 - CsaV3_6G014430.1 Csa06g01245 532872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01245 80 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 79 - -
Csa06g01245 80 SUPERFAMILY Cell cycle regulatory proteins 9 74 IPR036858 GO:0016538
Csa06g01245 80 Pfam Cyclin-dependent kinase regulatory subunit 9 61 IPR000789 GO:0016538
Csa06g01245 80 Gene3D - 6 75 IPR036858 GO:0016538
Csa06g01245 80 PRINTS Cyclin-dependent kinase regulatory subunit signature 9 23 IPR000789 GO:0016538
Csa06g01245 80 PRINTS Cyclin-dependent kinase regulatory subunit signature 31 45 IPR000789 GO:0016538
Csa06g01245 80 PRINTS Cyclin-dependent kinase regulatory subunit signature 46 60 IPR000789 GO:0016538
Csa06g01245 80 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 79 - -
Csa06g01245 80 SMART CKS_2 9 63 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g01406 Csa06g01245 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01406 Csa-Chr1:9613960 Csa06g01245 Csa-Chr6:10466855 9.85E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01245 K02219 - csv:105435797 150.984