Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01286 | ATGAGGGCTTTGCATTTGCAGCTTAGAGTTGACGCAAATCTCGTAAAGCCATTTTGTCATCTCTGCTTTGCTTCATCTCTGAATGTCTCGCCATTGATTGCTTTTCGACCTATAAAATACCCCCATCTTCAGAAATTCAATCCTTCACGAAGTTCTCGCCGAACCCATTTCTCAACATCATTCGTAGCTTCTTCCATGGCCGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTAGGTAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGGAACTTGGTGACGAAGAAGGATCTCGATTCCAAATTCACTATCGATTCTGCTGGTACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCCATAACATCCATCTCGAGGCCAATCCAGCCATCCGATTTTGTGAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTTGAACGTTGGTGCACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAGTTAATGTGCTCCTATTGTAAAAAGCATGACGAAACCGAAGTACCGGACCCTTATTACGGAGGGCAGCAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCCTGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA | 750 | 43.73 | MRALHLQLRVDANLVKPFCHLCFASSLNVSPLIAFRPIKYPHLQKFNPSRSSRRTHFSTSFVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKDLDSKFTIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWCTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD* | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10761966 | 10764366 | - | CsaV3_6G014840.1 | Csa06g01286 | 532913 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01286 | 249 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 84 | 237 | IPR023485 | - | |
Csa06g01286 | 249 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 80 | 240 | IPR036196 | - | |
Csa06g01286 | 249 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 84 | 101 | IPR017867 | GO:0004725|GO:0006470 | |
Csa06g01286 | 249 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 127 | 143 | IPR017867 | GO:0004725|GO:0006470 | |
Csa06g01286 | 249 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 211 | 226 | IPR017867 | GO:0004725|GO:0006470 | |
Csa06g01286 | 249 | CDD | LMWPTP | 83 | 238 | - | - | |
Csa06g01286 | 249 | Gene3D | - | 64 | 245 | - | - | |
Csa06g01286 | 249 | SMART | LMWPc_2 | 82 | 239 | IPR023485 | - | |
Csa06g01286 | 249 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 43 | 245 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01286 | K25307 | - | csv:101207515 | 486.493 |