Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01286 ATGAGGGCTTTGCATTTGCAGCTTAGAGTTGACGCAAATCTCGTAAAGCCATTTTGTCATCTCTGCTTTGCTTCATCTCTGAATGTCTCGCCATTGATTGCTTTTCGACCTATAAAATACCCCCATCTTCAGAAATTCAATCCTTCACGAAGTTCTCGCCGAACCCATTTCTCAACATCATTCGTAGCTTCTTCCATGGCCGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTAGGTAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGGAACTTGGTGACGAAGAAGGATCTCGATTCCAAATTCACTATCGATTCTGCTGGTACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCCATAACATCCATCTCGAGGCCAATCCAGCCATCCGATTTTGTGAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTTGAACGTTGGTGCACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAGTTAATGTGCTCCTATTGTAAAAAGCATGACGAAACCGAAGTACCGGACCCTTATTACGGAGGGCAGCAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCCTGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA 750 43.73 MRALHLQLRVDANLVKPFCHLCFASSLNVSPLIAFRPIKYPHLQKFNPSRSSRRTHFSTSFVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKDLDSKFTIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWCTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10761966 10764366 - CsaV3_6G014840.1 Csa06g01286 532913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01286 249 Pfam Low molecular weight phosphotyrosine protein phosphatase 84 237 IPR023485 -
Csa06g01286 249 SUPERFAMILY Phosphotyrosine protein phosphatases I 80 240 IPR036196 -
Csa06g01286 249 PRINTS LMW phosphotyrosine protein phosphatase signature 84 101 IPR017867 GO:0004725|GO:0006470
Csa06g01286 249 PRINTS LMW phosphotyrosine protein phosphatase signature 127 143 IPR017867 GO:0004725|GO:0006470
Csa06g01286 249 PRINTS LMW phosphotyrosine protein phosphatase signature 211 226 IPR017867 GO:0004725|GO:0006470
Csa06g01286 249 CDD LMWPTP 83 238 - -
Csa06g01286 249 Gene3D - 64 245 - -
Csa06g01286 249 SMART LMWPc_2 82 239 IPR023485 -
Csa06g01286 249 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 43 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01286 K25307 - csv:101207515 486.493