Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01408 ATGGCCGCCGCCTGTCCCACCGACTTCACTCACGACTCCGCCTGTCGCGACGGACGCGCCGCTGCCCACCTCAAACTAATCTCCATCTTCCTCATCTTCATCACCAGCGTCATCGGCGTCTCCTCCCCTGTTCTCCTCACTCGCTTCTTCCACGGCAAACCTCTCTACGACAAAGCCATCCTCACCGTCAAATCCTTCGCCGCCGGCGTTATTCTCTCCACCTCCCTCGTCCACGTACTCCCTGACGCCTTCGACGCACTCTCCGACTGCCGTATCGCCTCACAGCACCCCTGGCGCGACTTCCCATTCTCGGGCCTCGTCACCATGGTGGGCGCTCTCGTGGCGCTGTTCGTGGACGTGACGGCCACATCACACGTGGGACACGACCAGTATAATCCCGTGGAGGAGAAAGGTGGGGAGGAGTCGGGAGGGGAGATTGGGCTTCTGGTGGCAGGGGAGAGGAAATCGGAGGAAACAGGAGGGGGAGGAATTATTGGGGAAGAGGAATCGGTGAAGATGAAACAGAAATTGGTATCGAAAGTATTGGAAATAGGGATAATATTTCATTCGGTGATAATTGGAGTAACGATGGGAATGTCTCAGAATCAGTGTACCATTAAACCGCTTGTTGCTGCTCTTGCTTTTCATCAAATTTTTGAAGGAATGGGACTTGGTGGATGTATTGCTCAGGCAGGATTCAGCTTCACAACCACAGCGTATATGTGTTTCATGTTCTCAGTGACAACGCCAATGGGTATAATACTAGGTATGATTCTGTTTTCATTAACAGGTTATGACGATAGCAACCCCAAAGCTTTGATAATGGAAGGTTTATTAGGATCATTTTCATCTGGGATTCTCATATACATGGCTTTGGTAGATTTAATAGCCCTTGATTTTTTTCACAACAAGTTGATGACCTCAAATCATTGCCTCAAAAACATTTGTTTTATTGCCTTGTTGCTTGGCTCTACTTCCATGTCCATTTTGGCTTTGTGGGCTTGA 1005 49.65 MAAACPTDFTHDSACRDGRAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPLYDKAILTVKSFAAGVILSTSLVHVLPDAFDALSDCRIASQHPWRDFPFSGLVTMVGALVALFVDVTATSHVGHDQYNPVEEKGGEESGGEIGLLVAGERKSEETGGGGIIGEEESVKMKQKLVSKVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTAYMCFMFSVTTPMGIILGMILFSLTGYDDSNPKALIMEGLLGSFSSGILIYMALVDLIALDFFHNKLMTSNHCLKNICFIALLLGSTSMSILALWA* 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12028908 12030945 + CsaV3_6G016060.1 Csa06g01408 533035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01408 334 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 4 334 - -
Csa06g01408 334 TIGRFAM zip: ZIP zinc/iron transport family 11 334 IPR004698 GO:0005385|GO:0016021|GO:0071577
Csa06g01408 334 Pfam ZIP Zinc transporter 23 331 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa06g01408 334 PANTHER ZINC/IRON TRANSPORTER 4 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01408 Csa-Chr6:12028908 Csa06g03640 Csa-Chr6:29322423 2.29E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01408 K14709 - csv:101214729 636.721