Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01593 ATGGCGTCAACCGAAATCGCTGTAGACACAATCTTAATCAAAGAATATGGAAATGAGGATGCAAACCAACATCCCTTTCTTCATCATCTCACAGCTCAAGCCGCCACCGCCGCTGCCAACTTCAAACGCCAGAAACGGCACCGAGTTTCCCGAGAATGTGTATTGCCCAGCCGCCGCCGTTCCTTGGGCCACATTGTTAGTCATGCTGTGGCCCTCACATTTCTGCCGCTGCGTTTAGGTTTCAAATTTCTGCTATGCCTTTGGATAGGCTATAAATGGATAGCAAGATTTGTATCCCTTTTATGTTATGTGGCTTTTATTTCCCCTGGTTTACTTCAAGTTGCATATTATTATATTTACTGTGGACAGATCCGAAAAAACATAAAGTATGGCGATCAACCGAGAAATAGGTTGGATATATACCTACCAAAAACTAGGCATGGGCAGAAGCCAAAGCCTGTGGTTGTATTTGTAACTGGTGGAGCCTGGATTTTAGGTAATAAAGCATTGGGTTATCTTCTTGGATCACAGTTATCAGAGAGAGACATTATAGTAGCCTGCCTTGATTACAGAAATTTTCCTCAAGGAACTATGAGTGATATGATAAAGGATGTCTCTGAAGGCATCTCATTTGTATTCAATAATATCGAAGAGTACGGAGGCGATATCAACAGGATTTATCTAATGGGTCAGTCAGCTGGTGCGCATATCGCTGCTTGCGCAGTTGTAAAGCAGGCAATCAAAGAAGCTGGTGGTGAGAAAGTTTCTTGGTGTGTCTCCAGGATAAAAGCTTACTTTGGTTTGTCTGGGGGGTACAATTTGATAAATCTGAAGGACCACTTTCACAGTCGAGGTCTTCACAGATCCATCTTTTTAAGCATAATGGAAGGAGAACAGTCCCTGCAAAGATTTTCCCCAGAGGTTGTGGTACAGGATCCAAAGATTAAAGATGCAGTTTCCCTGCTTCCACACTTCATTTTATTTCATGGAACTGCAGATTATTCCATACCATCAGATTCCTGTAAGACCTTTGCAGAGGTGCTTGAAAGAATTGGAGTAAAAGTTGAAACGGTTCTATACAAAGGAAAGACGCACACAGATTTGTTTGTCCAGGATCCAATGAGAGGTGGTAAAGATCAGTTGGTTGAGGATTTGATTTCCATCATTCATGAAAATGATAGGGATGCTCTTGCTAGAAATCCAATGGCTCGCCAAAGAAGGCGCCTCGTACCGGAGTTACTGTTGAAGTTAGCATGTACTGTTAGCCCATTCTGA 1275 42.59 MASTEIAVDTILIKEYGNEDANQHPFLHHLTAQAATAAANFKRQKRHRVSRECVLPSRRRSLGHIVSHAVALTFLPLRLGFKFLLCLWIGYKWIARFVSLLCYVAFISPGLLQVAYYYIYCGQIRKNIKYGDQPRNRLDIYLPKTRHGQKPKPVVVFVTGGAWILGNKALGYLLGSQLSERDIIVACLDYRNFPQGTMSDMIKDVSEGISFVFNNIEEYGGDINRIYLMGQSAGAHIAACAVVKQAIKEAGGEKVSWCVSRIKAYFGLSGGYNLINLKDHFHSRGLHRSIFLSIMEGEQSLQRFSPEVVVQDPKIKDAVSLLPHFILFHGTADYSIPSDSCKTFAEVLERIGVKVETVLYKGKTHTDLFVQDPMRGGKDQLVEDLISIIHENDRDALARNPMARQRRRLVPELLLKLACTVSPF* 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13637941 13650162 - CsaV3_6G018900.1 Csa06g01593 533220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01593 424 Pfam BD-FAE 138 347 - -
Csa06g01593 424 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 41 415 - -
Csa06g01593 424 Gene3D alpha/beta hydrolase 121 374 IPR029058 -
Csa06g01593 424 PANTHER ARYLACETAMIDE DEACETYLASE 41 415 - -
Csa06g01593 424 SUPERFAMILY alpha/beta-Hydrolases 121 395 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02564 Csa-Chr5:27018138 Csa06g01593 Csa-Chr6:13637941 2.81E-177 dispersed
Csa06g01593 Csa-Chr6:13637941 Csa06g02734 Csa-Chr6:23876525 4.47E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01593 K15889 - csv:101213470 840.106