Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01602 ATGCCATCCCTCGTTCACTCTCTTTTGCTTTGTGTTCTTGTTTTATCAGCTTCCCTAATTCATACCCATGCACAACTAACTTCTAACTTTTACAACAATGTGTGCCCTAAGGCCTTGTCCACCATTAAGTCGGTCGTTTTGAATGCCATAAAAAACGAGCCTCGAATGGGAGCTTCACTCTTACGTCTCCATTTCCACGATTGCTTTGTCAATGGTTGTGATGGATCGGTCTTGTTAGATGATACTTCTACTTTTACTCGAGAAAAGACTGCACTTCCTAATGCTAATTCGATAAGAGGATTTGAAGTTATTGACCAGATTAAGACACAAGTCAACCAAGCTTGCAATGGAAATCTTGTGTCTTGTGCTGATATTTTAGCCGTTGCTGCTCGAGACTCTGTTGCTATCCTTGGAGGACCAAACTACAAAGTACTAGTAGGAAGAAGAGATGCAAGAACAACGAGTGTAAACGATGCCAACAGAAATCTTCCTCCACCATTTTTCAATGTCACACAGCTTCTTTCCAACTTCCAATCTCATGGCCTCGACCTCAAGGACCTCGTCGTCTTGTCGGCTGGCCACACTCTTGGGTATGCTCGGTGTACCAGTTTTCGAAATAGGATATACAATGACACCAACATCGACTCGAAATTTGCAGCGACATTGCAGGGAAACTGCCCACAAAGCGGTGGTGATGACAATCTAAGTGGTCTTGACAAGACTCCATATTCATTTGACAATGCCTACTTCAAGTTTTTGTTGAGCAACAAGGGTCTTCTCCACTCCGACCAAGAACTCTTCGGCGGTGGGAATGGCGACAGTGATAATTTGGTGAAATATTATAATACATACCCAAATGCATTCAAAAATGATTTTGCTTCTTCCATGATCAAAATGGGGAATATGAATCCACTTACCGGAAGTGACGGAGAAGTCAGAGCCAATTGCAGAGTTGTCAATTAA 963 42.58 MPSLVHSLLLCVLVLSASLIHTHAQLTSNFYNNVCPKALSTIKSVVLNAIKNEPRMGASLLRLHFHDCFVNGCDGSVLLDDTSTFTREKTALPNANSIRGFEVIDQIKTQVNQACNGNLVSCADILAVAARDSVAILGGPNYKVLVGRRDARTTSVNDANRNLPPPFFNVTQLLSNFQSHGLDLKDLVVLSAGHTLGYARCTSFRNRIYNDTNIDSKFAATLQGNCPQSGGDDNLSGLDKTPYSFDNAYFKFLLSNKGLLHSDQELFGGGNGDSDNLVKYYNTYPNAFKNDFASSMIKMGNMNPLTGSDGEVRANCRVVN* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13780505 13781873 - CsaV3_6G018990.1 Csa06g01602 533229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01602 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Csa06g01602 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PANTHER CATIONIC PEROXIDASE 8 319 - -
Csa06g01602 320 Gene3D - 29 317 - -
Csa06g01602 320 Gene3D Peroxidase, domain 2 164 299 - -
Csa06g01602 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Csa06g01602 320 Pfam Peroxidase 43 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 PANTHER PEROXIDASE 72-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01602 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Csa06g01602 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01602 Csa-Chr6:13780505 Csa06g01605 Csa-Chr6:13815526 1.04E-115 dispersed
Csa06g01602 Csa-Chr6:13780505 Csa06g01604 Csa-Chr6:13801029 7.35E-113 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01602 K00430 - csv:101204490 634.795