Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01604 | ATGGCCACCACAACCTTTTCTTCTCATAACAATATGACGTCGACTATGGCTTTAGCATTAGTCTTATTGGCAGTACTCATGGGAACCTCCTCAGCTCATCTTTCTCCCAACTTCTACCACAACACTTGTCCTAACCTCCTTAGCCTAGTTCGAGCTGGTGTTCGGTCTGCTGTTGCTAAGGAAGCTCGCATGGGTGCTTCCCTTCTCCGTCTCCACTTTCACGATTGTTTCGTCAATGGTTGCGATGGATCGATCCTTCTAGATGATACTCCTACATTTTTAGGAGAGCAAACAGCAGCTCCTAACAATAGATCTGTTAGAGGGTTCAATGTGATTGCCAATATAAAGGAGAAGATAGAAAAAATTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTTTATCTGCTCGTGACTCTGTTGTAGCATTGGGAGGGCCAAGTTGGAAAGTGAAATTGGGAAGGAGAGATTCCAAAACAGCCAGCTTCTCCGATGTCACTGGTGCCATTCCTCCACCGACCTCCACCCTTGCCACTCTCATCAATCGGTTCAATACCAAAGGCCTTTCCCCAAAGGATTTGGTTGCTTTATCTGGTGCTCACACAATTGGAAAAGCAAGATGTTTGTTTTTCAAGAATCGTATTTACAATGAAACCAATATCGACAAGTCATTTGCTAAGAAAAGACAAAAGAATTGTCCAAGAAATGGAGGAGACGATAATCGTACTCCTTTTGACTTCAGAACCCCAAACCTTTTCGATAACAATTACTACAAGAATCTTTTGGAGAAAAAGGCTTTGCTCCGCTCTGATCAAGTGCTACACAATGGTGGATCCACCGATTCTTTGGTTGAACTCTACAGTCATGACAGTGCAGCTTTTGAATCCGACTTCGTGGCAGCTATGATCAAAATGGGTGACATTGAACCACTCACTGGATTGCAAGGCGAGATCCGCAAAGTCTGTAGTCGACCCAACTAA | 981 | 43.73 | MATTTFSSHNNMTSTMALALVLLAVLMGTSSAHLSPNFYHNTCPNLLSLVRAGVRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFLGEQTAAPNNRSVRGFNVIANIKEKIEKICPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLATLINRFNTKGLSPKDLVALSGAHTIGKARCLFFKNRIYNETNIDKSFAKKRQKNCPRNGGDDNRTPFDFRTPNLFDNNYYKNLLEKKALLRSDQVLHNGGSTDSLVELYSHDSAAFESDFVAAMIKMGDIEPLTGLQGEIRKVCSRPN* | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 13801029 | 13802635 | + | CsaV3_6G019010.1 | Csa06g01604 | 533231 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01604 | 326 | Gene3D | Peroxidase, domain 2 | 171 | 305 | - | - | |
Csa06g01604 | 326 | ProSiteProfiles | Plant heme peroxidase family profile. | 33 | 326 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | Pfam | Peroxidase | 50 | 289 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Haem peroxidase superfamily signature | 65 | 79 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Haem peroxidase superfamily signature | 127 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Haem peroxidase superfamily signature | 145 | 157 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Haem peroxidase superfamily signature | 193 | 208 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | CDD | secretory_peroxidase | 33 | 324 | IPR033905 | GO:0004601|GO:0042744 | |
Csa06g01604 | 326 | PANTHER | PEROXIDASE | 12 | 323 | - | - | |
Csa06g01604 | 326 | SUPERFAMILY | Heme-dependent peroxidases | 34 | 326 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | Gene3D | - | 37 | 323 | - | - | |
Csa06g01604 | 326 | ProSitePatterns | Peroxidases active site signature. | 65 | 76 | IPR019794 | GO:0004601 | |
Csa06g01604 | 326 | PANTHER | PEROXIDASE 72-RELATED | 12 | 323 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 193 | 203 | IPR019793 | - | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 43 | 62 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 67 | 87 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 107 | 120 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 126 | 136 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 145 | 160 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 192 | 204 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01604 | 326 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g00978 | Csa-Chr5:8923929 | Csa06g01604 | Csa-Chr6:13801029 | 3.37E-136 | dispersed | |
Csa06g00217 | Csa-Chr6:1493533 | Csa06g01604 | Csa-Chr6:13801029 | 7.63E-139 | dispersed | |
Csa06g01604 | Csa-Chr6:13801029 | Csa06g01607 | Csa-Chr6:13836496 | 9.41E-165 | dispersed | |
Csa06g02923 | Csa-Chr6:25335342 | Csa06g01604 | Csa-Chr6:13801029 | 2.60E-100 | dispersed | |
Csa06g01602 | Csa-Chr6:13780505 | Csa06g01604 | Csa-Chr6:13801029 | 7.35E-113 | proximal | |
Csa06g01604 | Csa-Chr6:13801029 | Csa06g01605 | Csa-Chr6:13815526 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01604 | K00430 | - | csv:101208108 | 641.343 |