Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01605 | ATGGTTTTGACTTTACTATTAGCGTTGTTGGTCATGTTTACCGGCAGCTCTTCAGCTCAGCTCTCTACTAACTTTTACTATAAGACTTGTCCCAAGCTCCTTAACACGGTTAGAGCTGGTATTCACTCTGCTGTGGCTAAGGAAGCACGCATGGGCGCTTCACTTCTTCGCCTTCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCGATTCTTTTGGAAGATACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAATAGATCTGTTAGAGGTTTTGACGTGATTGAGAGCATAAAGAAAAATGTAGAAAAAATTTGTCCTGGTGTTGTCTCATGTGCTGATATTTTGACTCTTTCTGCTCGTGACTCTGTTGTAGTGCTTGGAGGGCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACAGCCAGCTTCTCTGATGTCACTGGTGCTATTCCTCCGCCAACCTCAACTCTTGACACCCTTATCAATCGATTCAACACAAAAGGCCTCTCCCCACGAGACTTGGTTGCCTTATCTGGGGCTCACACAATTGGACAAGCAAGATGTTTGTTTTTCAAGAACCGTATATACAATGAGACCAACATTGATGAGTCATTTGCTGAAGAGAGACAAAGGACTTGCCCAACGAATGGAGGAGATGACAATCGTGCCCCTTTAGACTTCAGAACTCCAAAGCTTTTTGACAATTACTACTACAAAAACCTCTTGGAGAAGAAGGCTTTGCTTCGGTCCGATCAAGTGCTCCACGACGGCGGATCCACTGATTCATTGGTTGAACTTTACAGCGATGACAGTGATACCTTTGAACATGATTTTGTTACAGCTATGATTAAAATGGGCGACATTCAACCGCTCACTGGATCACAAGGTGAGATTCGTAAGATTTGCAGCCGACCCAATTGA | 942 | 43.52 | MVLTLLLALLVMFTGSSSAQLSTNFYYKTCPKLLNTVRAGIHSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNRSVRGFDVIESIKKNVEKICPGVVSCADILTLSARDSVVVLGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLDTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNIDESFAEERQRTCPTNGGDDNRAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYSDDSDTFEHDFVTAMIKMGDIQPLTGSQGEIRKICSRPN* | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 13815526 | 13817108 | + | CsaV3_6G019020.1 | Csa06g01605 | 533232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01605 | 313 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - | |
Csa06g01605 | 313 | SUPERFAMILY | Heme-dependent peroxidases | 20 | 313 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | Gene3D | Peroxidase, domain 2 | 158 | 292 | - | - | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 30 | 49 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 54 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 94 | 107 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 113 | 123 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 132 | 147 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 179 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 231 | 246 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 247 | 264 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Plant peroxidase signature | 287 | 300 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | Pfam | Peroxidase | 37 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Haem peroxidase superfamily signature | 52 | 66 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Haem peroxidase superfamily signature | 114 | 131 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Haem peroxidase superfamily signature | 132 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PRINTS | Haem peroxidase superfamily signature | 233 | 248 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | PANTHER | PEROXIDASE | 4 | 310 | - | - | |
Csa06g01605 | 313 | PANTHER | PEROXIDASE 72-RELATED | 4 | 310 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | CDD | secretory_peroxidase | 20 | 311 | IPR033905 | GO:0004601|GO:0042744 | |
Csa06g01605 | 313 | ProSitePatterns | Peroxidases active site signature. | 52 | 63 | IPR019794 | GO:0004601 | |
Csa06g01605 | 313 | ProSiteProfiles | Plant heme peroxidase family profile. | 20 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01605 | 313 | Gene3D | - | 24 | 310 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g01602 | Csa-Chr6:13780505 | Csa06g01605 | Csa-Chr6:13815526 | 1.04E-115 | dispersed | |
Csa06g01605 | Csa-Chr6:13815526 | Csa07g00473 | Csa-Chr7:3441475 | 4.19E-125 | dispersed | |
Csa06g01605 | Csa-Chr6:13815526 | Csa06g01607 | Csa-Chr6:13836496 | 3.20E-167 | proximal | |
Csa06g01604 | Csa-Chr6:13801029 | Csa06g01605 | Csa-Chr6:13815526 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01605 | K00430 | - | csv:101204245 | 623.239 |