Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01605 ATGGTTTTGACTTTACTATTAGCGTTGTTGGTCATGTTTACCGGCAGCTCTTCAGCTCAGCTCTCTACTAACTTTTACTATAAGACTTGTCCCAAGCTCCTTAACACGGTTAGAGCTGGTATTCACTCTGCTGTGGCTAAGGAAGCACGCATGGGCGCTTCACTTCTTCGCCTTCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCGATTCTTTTGGAAGATACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAATAGATCTGTTAGAGGTTTTGACGTGATTGAGAGCATAAAGAAAAATGTAGAAAAAATTTGTCCTGGTGTTGTCTCATGTGCTGATATTTTGACTCTTTCTGCTCGTGACTCTGTTGTAGTGCTTGGAGGGCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACAGCCAGCTTCTCTGATGTCACTGGTGCTATTCCTCCGCCAACCTCAACTCTTGACACCCTTATCAATCGATTCAACACAAAAGGCCTCTCCCCACGAGACTTGGTTGCCTTATCTGGGGCTCACACAATTGGACAAGCAAGATGTTTGTTTTTCAAGAACCGTATATACAATGAGACCAACATTGATGAGTCATTTGCTGAAGAGAGACAAAGGACTTGCCCAACGAATGGAGGAGATGACAATCGTGCCCCTTTAGACTTCAGAACTCCAAAGCTTTTTGACAATTACTACTACAAAAACCTCTTGGAGAAGAAGGCTTTGCTTCGGTCCGATCAAGTGCTCCACGACGGCGGATCCACTGATTCATTGGTTGAACTTTACAGCGATGACAGTGATACCTTTGAACATGATTTTGTTACAGCTATGATTAAAATGGGCGACATTCAACCGCTCACTGGATCACAAGGTGAGATTCGTAAGATTTGCAGCCGACCCAATTGA 942 43.52 MVLTLLLALLVMFTGSSSAQLSTNFYYKTCPKLLNTVRAGIHSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNRSVRGFDVIESIKKNVEKICPGVVSCADILTLSARDSVVVLGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLDTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNIDESFAEERQRTCPTNGGDDNRAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYSDDSDTFEHDFVTAMIKMGDIQPLTGSQGEIRKICSRPN* 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13815526 13817108 + CsaV3_6G019020.1 Csa06g01605 533232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01605 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Csa06g01605 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 Gene3D Peroxidase, domain 2 158 292 - -
Csa06g01605 313 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 Pfam Peroxidase 37 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 PANTHER PEROXIDASE 4 310 - -
Csa06g01605 313 PANTHER PEROXIDASE 72-RELATED 4 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 CDD secretory_peroxidase 20 311 IPR033905 GO:0004601|GO:0042744
Csa06g01605 313 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Csa06g01605 313 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g01605 313 Gene3D - 24 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01602 Csa-Chr6:13780505 Csa06g01605 Csa-Chr6:13815526 1.04E-115 dispersed
Csa06g01605 Csa-Chr6:13815526 Csa07g00473 Csa-Chr7:3441475 4.19E-125 dispersed
Csa06g01605 Csa-Chr6:13815526 Csa06g01607 Csa-Chr6:13836496 3.20E-167 proximal
Csa06g01604 Csa-Chr6:13801029 Csa06g01605 Csa-Chr6:13815526 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01605 K00430 - csv:101204245 623.239