Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01607 | ATGGCTTTTACTACTCACACTCCAAAACATGTGGTGCCTTTGGTTCTAGTTTTGCAGCTAACCTTCCTTTTGATGAGCACCTCTTTCGCTCAACTATCCGTTTCTTTCTACTCCAACACTTGCCCTAAGCTCCTCTCTGTAATCCGCTCTGGTGTTCAATCTGCCATCACCAAGGAAGCCCGTATTGGCGCTTCTCTCCTTCGTCTTCACTTCCATGACTGCTTTGTTAACGGATGCGATGGATCAATCCTTTTAGATGATACTGCAACTTTTAGAGGAGAACAAACAGCGCCTCCAAACAATAGGTCTGTTAGAGGCTTTGATGTCATAAAAGCCATCAAGAGTAACATTGAAAAAGTTTGTCCTGGTGTGGTCTCATGTGCTGATATTTTGACTCTTGCTGCACGTGATTCTGTTAACATTTTGGGAGGGCCAACATGGGAAGTGAAATTAGGAAGAAGAGATTCAAAAACAGCCAGCTTCTCTGCTGCTAGTAGTGGCATCATCCCTCCCCCTACTTCAACCCTTTCCAACCTCATCAATCGATTCAATGTTGTAGGACTCTCCGCCAAAGACATGGTTGCCTTGTCTGGTGCACACACGATAGGCCAAGCAAGGTGTGTAACCTTTAGAAATCGCATATACAACGAGAGCAACATAGACGTCTCATTCGCGAAGCTAAGACAAAGGAGTTGTCCAAGAAGTGGAGGAGATGACAATCTTGCCCCTCTAGATTTTACAACCCCAAAGTTTTTTGATAACAATTACTACAAGAACCTTTTGAATAATAAGGGGTTGCTCCACTCTGACCAGGTCCTCCACAATGGCGGATCCACCGATTCTTTGGTCCAACAGTATAGTCAAAATGATAAGACTTTTGACACTGATTTTGTGACAGCAATGATTAAAATGGGAGACATTCAACCGCTCACTGGATCACAGGGCGAGATCAGAAAAGTCTGCAACAGACCAAACTGA | 978 | 44.07 | MAFTTHTPKHVVPLVLVLQLTFLLMSTSFAQLSVSFYSNTCPKLLSVIRSGVQSAITKEARIGASLLRLHFHDCFVNGCDGSILLDDTATFRGEQTAPPNNRSVRGFDVIKAIKSNIEKVCPGVVSCADILTLAARDSVNILGGPTWEVKLGRRDSKTASFSAASSGIIPPPTSTLSNLINRFNVVGLSAKDMVALSGAHTIGQARCVTFRNRIYNESNIDVSFAKLRQRSCPRSGGDDNLAPLDFTTPKFFDNNYYKNLLNNKGLLHSDQVLHNGGSTDSLVQQYSQNDKTFDTDFVTAMIKMGDIQPLTGSQGEIRKVCNRPN* | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 13836496 | 13838355 | + | CsaV3_6G019040.1 | Csa06g01607 | 533234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01607 | 325 | Pfam | Peroxidase | 49 | 289 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 41 | 60 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 65 | 85 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 124 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 143 | 158 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 191 | 203 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 243 | 258 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 259 | 276 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Plant peroxidase signature | 299 | 312 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PANTHER | PEROXIDASE | 15 | 324 | - | - | |
Csa06g01607 | 325 | PRINTS | Haem peroxidase superfamily signature | 63 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Haem peroxidase superfamily signature | 125 | 142 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Haem peroxidase superfamily signature | 143 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Haem peroxidase superfamily signature | 192 | 207 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | PRINTS | Haem peroxidase superfamily signature | 245 | 260 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 192 | 202 | IPR019793 | - | |
Csa06g01607 | 325 | Gene3D | Peroxidase, domain 2 | 170 | 304 | - | - | |
Csa06g01607 | 325 | PANTHER | PEROXIDASE 72-RELATED | 15 | 324 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | ProSiteProfiles | Plant heme peroxidase family profile. | 31 | 325 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | Gene3D | - | 36 | 322 | - | - | |
Csa06g01607 | 325 | CDD | secretory_peroxidase | 31 | 323 | IPR033905 | GO:0004601|GO:0042744 | |
Csa06g01607 | 325 | SUPERFAMILY | Heme-dependent peroxidases | 31 | 325 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g01607 | 325 | ProSitePatterns | Peroxidases active site signature. | 63 | 74 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g01604 | Csa-Chr6:13801029 | Csa06g01607 | Csa-Chr6:13836496 | 9.41E-165 | dispersed | |
Csa06g01607 | Csa-Chr6:13836496 | Csa07g00473 | Csa-Chr7:3441475 | 6.58E-123 | dispersed | |
Csa06g01605 | Csa-Chr6:13815526 | Csa06g01607 | Csa-Chr6:13836496 | 3.20E-167 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01607 | K00430 | - | csv:101207371 | 626.32 |