Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01632 ATGGGTTGCGTTTATTCGAGGGTTTGTATTGGCGAAGCTACAACTCCAAGATCTTCGAGAATTGCCGAAACTCAAAATGCCAAAACCGCCACTGAAATCGATACGATCTCTTCTTCGTCTTCCGATAGCCAAGAAGGTGAGACCGGCGACCGACTGAATCAACTGAATTCAAACAACAGAGATTCAGAAGCTGGAATCACGAGACTCTCGAGAGTTTCATCCCAGTTCTTGCCCGCCGAGGGGTCCCGAACCGTTAAAGTTCCTTCTGGAAACTTCGAACTTCGATATTCGTTCCTTTCTCAAAGAGGGTATTATCCTGATGCCCTTGATAAGGCAAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGATCATTTCTTCGGGGTTTTCGATGGGCATGGGGAATACGGAGCACAGTGCTCGCAGTTTGTTAAACGGAAGCTCTGTGAAAATTTGCTTAGGAATAGTAGGTTCCAAAGTGATGCAGTTGAGGCTTGTCATGCGGCCTATTTAACAACTAATTCACAGTTACACGCTGATATCTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTAGGACTATATATGTTGCTAATTCAGGTGATTCGAGGGCAGTCATAGCAGAGCGGAGAGGAAAGGAAGTTGTGGCTGTTGACCTTTCGATTGACCAAACTCCATTTCGAACTGATGAACTCGAACGTGTTAAGCTTTGTGGTGCTAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAATCCTGATATTCAGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTTTGGGTGCCCAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATTGGTGACTCAATTGCTGAGACTATTGGAGTCGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACAGGATCATCCTTTCTTTGTTGTTGCTAGTGATGGGGTATTCGAGTTTCTTTCAAGCCAAACAGTGGTCGACATGGTTCGTAAATATAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTATTCTTGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCTGGTGGAGGAGGTTTTGTTCCGTCTGCTATTCCTCAAGTCATGGAAGTGACAGGATCAGAGTCTCCCTCTACATTTGGCTGGAATAGAAACAATCGTGCAAGGCAAGATTTGTCGAGGGCGCGTCTCCGGGCTATCGAAAGTTCTCTAGAAAATGGTCAAGTCTGGGTACCTCCGTCTCCAGCTCACAGGAAGTCATGGGAAGAAGAAGAAGAAAGCCATGGAGAGGTCCCTAGGGTTTTACAACACTACACAGCGGAGAAGCTCTCTTCCTTTGGCGAATTGGCTTTGATGTATAACAAACCACTTCAAGCCTCTGTGCGTGCGGTGACAAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTCTTGTCGAAGTTAACAATCTTGCAATTGAGTCACATTGCAGACTGCCTTTCTGAAGTTCAATTCTCAGATGGGGAGCTGATTGTTGATGGGACTGAAGGCTCGTGTGCACTGCACATTATTCAGAAGGGGCAAGTGAGGATTACTTTTGATGCAGAGTTAATGAGCAATTCAAATGTTTACAGCTTCAATTATGTCAGTCAAAAAGAGGACGGTGCTGCACAGAGTGGTAGCGAGATTTCAGCTATTAGGAAAGAGGGAAGTTATTTTGGCGAGTGGGCACTTCTTGGTGAGCGTATCGGCTTCTTACGTGCAGTTGCTGTGGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCCATACCAAAGCTCTCTCAAGATGATCAAAAGGCGACAGAACACTCTTTAAACTCTCTCCATCAGTCTGCCAAAATTATTGATATTTCAGCTCTTTCTAAAGTTGGGCTCTCCGATCTGGAGTGGAAAATGTGTTTATATTCCACGGAATACAGTGAAATTGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTTCAAGACAGAAGGTCAAATGGCTGGGACTTGAAGCACAGGTTTTGAAGGAGAAAAATCTTATGAAGACCATTAGTTCTTCAGCTTGTGTGCCGGAACTTCTCTGCACTTGTTTTGATCAATCACATGCTGGCATACTGCTAAAGACATGCCTGGCTTGCCCTTTGTCTTCGATACTTCACGTCCCACTAGATGAATTTTCTGCACGTTTCTTTGCAGCCTCTCTTATTATGGCAATGGAGGATTTGCACAAGATTGGTGTTCTCCACAGAGGAATTTCCCCTGATGTTCTAATGTTGGATCAAACCGGACACATACAGTTGGTAGACTTCAGATTTGGGAAAAAAACTTTGGGTGAGAGAACATTTACTATTTGCGGGACGGCCGACTTTTTAGCACCTGAGATAGTTCAAGGCAATGGTCATGGCTTTGCTGCTGACTGGTGGGCACTGGGAGTTTTAATCCATTTCATGCTGAAATGTGAAATGCCATTTGGATCGTGGCGACAAAGCGAGCTTGATACTTTTTCGAAGATTGCAAAAGGTCAACTAAGTCTTCCCCAGATTTTCAGTCCTGAAGCAATCGATCTCATCACCAAGTTACTTGAAGTCGATGAGAAGAAAAGACTTGGAAACGAGAACCAAAACTCTGTTAGAAGTCATCCATGGTTTGATGGCGTTGATTGGAAGGGGATCCATGAGGGTACCTTTCCCGTTCCTGAAACAATAACTTCTCGTGTAGCTCAATATTTGGAGAGCTACTCTGAAAATTGCAGTGTTTCTTTAACTAAACCACCTCAAGATCTTGAAGAACAGAAAGTCCCCGAGTGGATCAACGACTGGTAG 3060 44.05 MGCVYSRVCIGEATTPRSSRIAETQNAKTATEIDTISSSSSDSQEGETGDRLNQLNSNNRDSEAGITRLSRVSSQFLPAEGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEYGAQCSQFVKRKLCENLLRNSRFQSDAVEACHAAYLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDIQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTQDHPFFVVASDGVFEFLSSQTVVDMVRKYKDPRDACAAIVAESYRLWLQFETRTDDITILVVHINGLTNTVTSESTRSGGGGFVPSAIPQVMEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKSWEEEEESHGEVPRVLQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIADCLSEVQFSDGELIVDGTEGSCALHIIQKGQVRITFDAELMSNSNVYSFNYVSQKEDGAAQSGSEISAIRKEGSYFGEWALLGERIGFLRAVAVGDVVCAILTKEKFESVVGPIPKLSQDDQKATEHSLNSLHQSAKIIDISALSKVGLSDLEWKMCLYSTEYSEIGLVRLRNTETMLSLKRFSRQKVKWLGLEAQVLKEKNLMKTISSSACVPELLCTCFDQSHAGILLKTCLACPLSSILHVPLDEFSARFFAASLIMAMEDLHKIGVLHRGISPDVLMLDQTGHIQLVDFRFGKKTLGERTFTICGTADFLAPEIVQGNGHGFAADWWALGVLIHFMLKCEMPFGSWRQSELDTFSKIAKGQLSLPQIFSPEAIDLITKLLEVDEKKRLGNENQNSVRSHPWFDGVDWKGIHEGTFPVPETITSRVAQYLESYSENCSVSLTKPPQDLEEQKVPEWINDW* 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14302753 14307733 + CsaV3_6G021270.1 Csa06g01632 533259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01632 1019 ProSiteProfiles Protein kinase domain profile. 708 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa06g01632 1019 SUPERFAMILY cAMP-binding domain-like 536 675 IPR018490 -
Csa06g01632 1019 CDD CAP_ED 489 525 IPR000595 -
Csa06g01632 1019 MobiDBLite consensus disorder prediction 16 64 - -
Csa06g01632 1019 Gene3D Jelly Rolls 530 687 IPR014710 -
Csa06g01632 1019 MobiDBLite consensus disorder prediction 17 64 - -
Csa06g01632 1019 Pfam Cyclic nucleotide-binding domain 487 525 IPR000595 -
Csa06g01632 1019 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Csa06g01632 1019 ProSiteProfiles cAMP/cGMP binding motif profile. 543 669 IPR000595 -
Csa06g01632 1019 Gene3D - 89 386 IPR036457 -
Csa06g01632 1019 SMART PP2C_4 91 383 IPR001932 -
Csa06g01632 1019 Gene3D Jelly Rolls 448 525 IPR014710 -
Csa06g01632 1019 SUPERFAMILY cAMP-binding domain-like 483 526 IPR018490 -
Csa06g01632 1019 CDD PP2Cc 111 385 IPR001932 -
Csa06g01632 1019 Gene3D Phosphorylase Kinase; domain 1 707 792 - -
Csa06g01632 1019 Pfam Protein phosphatase 2C 122 363 IPR001932 -
Csa06g01632 1019 SUPERFAMILY PP2C-like 83 387 IPR036457 -
Csa06g01632 1019 SUPERFAMILY Protein kinase-like (PK-like) 699 993 IPR011009 -
Csa06g01632 1019 Pfam Protein kinase domain 719 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa06g01632 1019 Gene3D Transferase(Phosphotransferase) domain 1 793 977 - -
Csa06g01632 1019 ProSiteProfiles cAMP/cGMP binding motif profile. 488 525 IPR000595 -
Csa06g01632 1019 CDD CAP_ED 543 675 IPR000595 -
Csa06g01632 1019 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 484 1019 - -
Csa06g01632 1019 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 22 472 - -
Csa06g01632 1019 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Csa06g01632 1019 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 484 1019 - -
Csa06g01632 1019 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 22 472 - -
Csa06g01632 1019 SMART serkin_6 715 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00474 Csa-Chr2:3366498 Csa06g01632 Csa-Chr6:14302753 4.05E-29 dispersed
Csa03g01389 Csa-Chr3:10409924 Csa06g01632 Csa-Chr6:14302753 3.72E-141 dispersed
Csa06g00552 Csa-Chr6:4746163 Csa06g01632 Csa-Chr6:14302753 8.56E-143 dispersed
Csa06g01632 Csa-Chr6:14302753 Csa02g01055 Csa-Chr2:10236107 2.28E-34 dispersed
Csa07g00429 Csa-Chr7:3097301 Csa06g01632 Csa-Chr6:14302753 3.40E-28 dispersed
Csa06g01632 Csa-Chr6:14302753 Csa01g01647 Csa-Chr1:12225796 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78368 PF00069 Pkinase 4.50E-34 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01632 - - csin:114283492 1325.46