Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01679 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACATGGGCCGTCGCCGCCGTGTGCTTTGTTTTGGTTCTGATTTCTATTATCATCGAACACATTCTCCATCTCATCGGAAAGTGGCTAAAGAAGAAACACAAACGAGCTCTCTACGAAGCTCTGGAGAAGATTAAATCAGAACTGATGCTGTTGGGATTCATATCGCTGCTGCTGACGGTGGGACAAAGCCTAATCACAAATGTTTGTATACCACCTGACGTGGCAGCCACGTGGCATCCATGTAGTCCTCAAAGAGAAGAAGAATTAACTAAAGAAGCTGACCTCGTCGATTCCGACCAAAATCGTCGAAAACTTCTCGCCCTCTCCCATCACGTCAACGCCACCTTCCGCCGTTCCCTCGCCGCTGCCGGTGGTACCGACAAATGTGCTGCCAAGGGTAAAGTTCCATTTGTATCGGAAGGGGGTATTCATCAGCTACATATATTCATCTTCGTACTGGCAGTTTTCCATGTTTTGTATTGTGTTTTAACTTTAGCTTTGGGCAATGCCAAGATGAGAAGTTGGAAGTCATGGGAAAAAGAGACAAGAACTGTGGAGTATCAATTCTCACACGATCCGGAACGGTTTCGATTTGCAAGAGACACGTCATTTGGGAGAAGACATTTAAGCTTTTGGACAAAATCCCCTTTCCTCATATGGATTGTTTGTTTCTTCAGACAATTCGTTAGGTCGGTTCCAAAGGTTGATTACTTGACCTTAAGACATGGTTTCGTCATGGCACATCTGGCACCGCACAGCGATCAGAAATTTGACTTTCAAAAATACATAAAACGATCTCTTGAAGAAGATTTCAAGGTGGTGGTCAGTATCAGCCCTCCGATATGGTTCTTTGCTGTCCTCTTCCTACTTTTCAACACCCACGGGTGGAGGGCTTATCTATGGCTACCCTTTGTTCCGTTAATTATAGTGTTATTGGTGGGGACAAAGTTGCAAGTGATAATAACGAAAATGGCGCTGAGGATACAAGAAAGAGGAGAAGTGGTGAAAGGAGTGCCGGTGGTAGAGCCAGGGGATGACCTTTTTTGGTTCAATCGCCCTCGTCTTATTCTTTACCTTATCAATTTTGTCCTCTTCCAGAATGCCTTTCAGCTTGCCTTTTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCATGAGCACACAGAGGATTTGGTCATCAGAATAACAATGGGGGTTCTCGTTCAAATCCTTTGCAGTTATGTCACATTGCCACTTTACGCTCTAGTCACACAGATGGGTTCGACGATGAAGCCCACGATTTTCAACGAAAGAGTAGCGACGGCGTTGAGAAATTGGCACCACACCGCTCGTAAACACATAAAACAAAATCGTGGCTCAATGACGCCGATGTCGAGCCGCCCTGCAACCCCCTCCCACCACTTGTCACCCGTCCACCTCCTTCGCCACTATCGAAGCGAATTAGATAGCGTTCATACGTCTCCTAGAAGATCCAATTTCGACACCGATCAGTGGGACCCTGATTCCCCTTCCCCTTCCCCTTCTCACCACTTTCATCGTCGTCCCCATCCCGGCGACGGCTCCATTTCCAACCATCACCGTGATGTGGAGGCCGGGGATCTTGATGTCGATGTTGAATCGCCTCAACCCGACCGAACGACCCAGTCAATAAACCCAACAAATATTGAGCACCATGAAATTGACGTGGGGTCTAACGAATTCTCATTCGATAGAAGAGTTGATAGAGTATAA 1782 46.91 MAGGGAGRSLEETPTWAVAAVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPDVAATWHPCSPQREEELTKEADLVDSDQNRRKLLALSHHVNATFRRSLAAAGGTDKCAAKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLIWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALRNWHHTARKHIKQNRGSMTPMSSRPATPSHHLSPVHLLRHYRSELDSVHTSPRRSNFDTDQWDPDSPSPSPSHHFHRRPHPGDGSISNHHRDVEAGDLDVDVESPQPDRTTQSINPTNIEHHEIDVGSNEFSFDRRVDRV* 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14713131 14719143 + CsaV3_6G021740.1 Csa06g01679 533306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01679 593 PANTHER MLO-LIKE PROTEIN 1 1 534 IPR004326 GO:0006952|GO:0016021
Csa06g01679 593 MobiDBLite consensus disorder prediction 500 574 - -
Csa06g01679 593 MobiDBLite consensus disorder prediction 461 484 - -
Csa06g01679 593 MobiDBLite consensus disorder prediction 558 572 - -
Csa06g01679 593 PANTHER MLO-LIKE PROTEIN 1 534 - -
Csa06g01679 593 MobiDBLite consensus disorder prediction 523 557 - -
Csa06g01679 593 MobiDBLite consensus disorder prediction 466 482 - -
Csa06g01679 593 Pfam Mlo family 8 494 IPR004326 GO:0006952|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g01298 Csa06g01679 CCT
Csa01g01298 Csa06g01679 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01298 Csa-Chr1:8280574 Csa06g01679 Csa-Chr6:14713131 1.57E-170 dispersed
Csa02g02634 Csa-Chr2:22929813 Csa06g01679 Csa-Chr6:14713131 7.29E-14 dispersed
Csa06g01679 Csa-Chr6:14713131 Csa06g03404 Csa-Chr6:28194532 1.68E-176 dispersed
Csa02g01639 Csa-Chr2:15516959 Csa06g01679 Csa-Chr6:14713131 4.12E-106 transposed
Csa03g00073 Csa-Chr3:600368 Csa06g01679 Csa-Chr6:14713131 2.50E-94 transposed
Csa03g01923 Csa-Chr3:15003227 Csa06g01679 Csa-Chr6:14713131 1.01E-108 transposed
Csa04g02353 Csa-Chr4:23944644 Csa06g01679 Csa-Chr6:14713131 2.33E-121 transposed
Csa05g02821 Csa-Chr5:28700815 Csa06g01679 Csa-Chr6:14713131 0 transposed
Csa05g02923 Csa-Chr5:29673306 Csa06g01679 Csa-Chr6:14713131 7.29E-116 transposed
Csa06g00633 Csa-Chr6:5305552 Csa06g01679 Csa-Chr6:14713131 4.22E-131 transposed
Csa01g01295 Csa-Chr1:8230778 Csa06g01679 Csa-Chr6:14713131 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01679 K08472 - csv:101212018 1163.29