Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01863 | ATGGCGTCATCTGTTCTTTCGAACTCCGATCGTGCACGGGAGTCTTCTTCGAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAATAGAGATCATCATCAAAACCAGAATCATCATATTAAATGGAAATCTCAAGCTCAACAGGAAATTTACTCATCTAAGCTAGTACGAGCATTGAATCAAGTCAGACTCGGTCCTTCAAACGAGGCGCCGCCACGCCGCGGCAGAGCTGTACGTGAAGCCGCCGATAGAGTCCTTGCCGTTGCCGCCAAGGGGAGAACTAGATGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGGCGCCAAAGAGACAGAGATCAACATCCACCGCTGGAAACAACCGCTCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAGAGGGAAATCCTTGCCGGCAGTACAAAGGAAAGTTAGGGTCCTTGGTCGGCTGGTTCCCGGTTGCCGGAAAGAACCATTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGCTTCAACTTCTGCTGCAGGCTCTAGTTCATCTCCTCCAAGCTGA | 621 | 49.76 | MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQVRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTSTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSSPPS* | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 16812784 | 16815830 | - | CsaV3_6G028530.1 | Csa06g01863 | 533490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01863 | 206 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Csa06g01863 | 206 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 16 | 205 | IPR044660 | GO:0006355 | |
Csa06g01863 | 206 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 147 | 195 | IPR036638 | GO:0046983 | |
Csa06g01863 | 206 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 16 | 205 | - | - | |
Csa06g01863 | 206 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Csa06g01863 | 206 | MobiDBLite | consensus disorder prediction | 109 | 130 | - | - | |
Csa06g01863 | 206 | CDD | bHLH_AtIBH1_like | 133 | 188 | IPR044549 | GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00511 | Csa-Chr2:3606325 | Csa06g01863 | Csa-Chr6:16812784 | 9.50E-44 | dispersed | |
Csa03g01527 | Csa-Chr3:11336382 | Csa06g01863 | Csa-Chr6:16812784 | 6.31E-75 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01863 | - | - | csv:101220618 | 341.273 |