Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g01897 ATGTCAATGAACTTATCTCTTCCGATCATCATCTTGATCTTCTTCTTGTTTCTCTCCCATTTCCCCTTTCTTTCCCTTTCTTTTCTCCTTAATCAGAACATCACCCTCTCCGGTGATGCCCATCTCAGAAACAACGCCATTTTTCTCACTCAAGAACGCGACTGCCTTTCCCTTTCTCCAAACTCCTCTTCCTCTGCCTCCGGCTTCGGCTCTGCCGTCTACGTCAATCCCGTTCGCTTTCTTGATTCCTCCACCAATTCTTCTGCTTCTTTCTCCTCTCGTTTCTCCCTCTCCATCCTCCCCACCCCTCTCTGTTCTTTCCCCGATGGTTTCGCCTTCCTCATTGCCTCCGATCCCGAATCTTTTACCCTCTCCAACAGCCATATACCCCTTCCCAACCCCTCTCATAGCTCCCCTTTCTCCTTCATCGCTGTCGAATTCGATACCAACTTCGACTCTAATCTTGGCGACATTAATGACAACCATCTCGGTCTCAATGTCAATTCGCCCACCTCTTTGACCTCTGTGGATTTTCGATCTCATGGCATTGTTCTCAAAAATGGCAGAAAGATTACTGCTTGGATTGAGTATCGAGATGACTCCAAAACGATTCGGGTTTGGGTTGGTTATTCGCAAACGAGACCTGTGAATCCTCTTTTAGCTGCACCGATGGATCTTTCTAAGCAATTTAAGGAGTTTATGTATGTGGGATTCTCTGCTTCCAATGGGCAGGGCTCTGCTCTTTTCATTGTTGATCGTTGGCAGTTCCGAACTTTCGGTTGCTTCCTTCTTTGA 795 46.92 MSMNLSLPIIILIFFLFLSHFPFLSLSFLLNQNITLSGDAHLRNNAIFLTQERDCLSLSPNSSSSASGFGSAVYVNPVRFLDSSTNSSASFSSRFSLSILPTPLCSFPDGFAFLIASDPESFTLSNSHIPLPNPSHSSPFSFIAVEFDTNFDSNLGDINDNHLGLNVNSPTSLTSVDFRSHGIVLKNGRKITAWIEYRDDSKTIRVWVGYSQTRPVNPLLAAPMDLSKQFKEFMYVGFSASNGQGSALFIVDRWQFRTFGCFLL* 265
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 17104953 17105811 + CsaV3_6G030850.1 Csa06g01897 533524
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa06g01897 264 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Csa06g01897 264 CDD lectin_legume_LecRK_Arcelin_ConA 31 260 IPR001220 GO:0030246
Csa06g01897 264 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 258 IPR013320 -
Csa06g01897 264 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 29 258 - -
Csa06g01897 264 Gene3D - 19 259 - -
Csa06g01897 264 PANTHER - 29 258 - -
Csa06g01897 264 Pfam Legume lectin domain 27 257 IPR001220 GO:0030246
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01897 Csa-Chr6:17104953 Csa03g00423 Csa-Chr3:3588410 2.93E-43 dispersed
Csa06g01876 Csa-Chr6:16922002 Csa06g01897 Csa-Chr6:17104953 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g01897 - - csv:101206470 445.662