Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g01897 | ATGTCAATGAACTTATCTCTTCCGATCATCATCTTGATCTTCTTCTTGTTTCTCTCCCATTTCCCCTTTCTTTCCCTTTCTTTTCTCCTTAATCAGAACATCACCCTCTCCGGTGATGCCCATCTCAGAAACAACGCCATTTTTCTCACTCAAGAACGCGACTGCCTTTCCCTTTCTCCAAACTCCTCTTCCTCTGCCTCCGGCTTCGGCTCTGCCGTCTACGTCAATCCCGTTCGCTTTCTTGATTCCTCCACCAATTCTTCTGCTTCTTTCTCCTCTCGTTTCTCCCTCTCCATCCTCCCCACCCCTCTCTGTTCTTTCCCCGATGGTTTCGCCTTCCTCATTGCCTCCGATCCCGAATCTTTTACCCTCTCCAACAGCCATATACCCCTTCCCAACCCCTCTCATAGCTCCCCTTTCTCCTTCATCGCTGTCGAATTCGATACCAACTTCGACTCTAATCTTGGCGACATTAATGACAACCATCTCGGTCTCAATGTCAATTCGCCCACCTCTTTGACCTCTGTGGATTTTCGATCTCATGGCATTGTTCTCAAAAATGGCAGAAAGATTACTGCTTGGATTGAGTATCGAGATGACTCCAAAACGATTCGGGTTTGGGTTGGTTATTCGCAAACGAGACCTGTGAATCCTCTTTTAGCTGCACCGATGGATCTTTCTAAGCAATTTAAGGAGTTTATGTATGTGGGATTCTCTGCTTCCAATGGGCAGGGCTCTGCTCTTTTCATTGTTGATCGTTGGCAGTTCCGAACTTTCGGTTGCTTCCTTCTTTGA | 795 | 46.92 | MSMNLSLPIIILIFFLFLSHFPFLSLSFLLNQNITLSGDAHLRNNAIFLTQERDCLSLSPNSSSSASGFGSAVYVNPVRFLDSSTNSSASFSSRFSLSILPTPLCSFPDGFAFLIASDPESFTLSNSHIPLPNPSHSSPFSFIAVEFDTNFDSNLGDINDNHLGLNVNSPTSLTSVDFRSHGIVLKNGRKITAWIEYRDDSKTIRVWVGYSQTRPVNPLLAAPMDLSKQFKEFMYVGFSASNGQGSALFIVDRWQFRTFGCFLL* | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 17104953 | 17105811 | + | CsaV3_6G030850.1 | Csa06g01897 | 533524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g01897 | 264 | ProSitePatterns | Legume lectins beta-chain signature. | 143 | 149 | IPR019825 | - | |
Csa06g01897 | 264 | CDD | lectin_legume_LecRK_Arcelin_ConA | 31 | 260 | IPR001220 | GO:0030246 | |
Csa06g01897 | 264 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 13 | 258 | IPR013320 | - | |
Csa06g01897 | 264 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 | 29 | 258 | - | - | |
Csa06g01897 | 264 | Gene3D | - | 19 | 259 | - | - | |
Csa06g01897 | 264 | PANTHER | - | 29 | 258 | - | - | |
Csa06g01897 | 264 | Pfam | Legume lectin domain | 27 | 257 | IPR001220 | GO:0030246 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g01897 | Csa-Chr6:17104953 | Csa03g00423 | Csa-Chr3:3588410 | 2.93E-43 | dispersed | |
Csa06g01876 | Csa-Chr6:16922002 | Csa06g01897 | Csa-Chr6:17104953 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g01897 | - | - | csv:101206470 | 445.662 |