Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02083 ATGGATGCATCACGAGGGGTAAAGAAGAGAGGCCATGGAAATCGTTCTTGGATAAAGATAGATCAGGAAGGGAACTCAGAGGTTTTGGAACTTGAGAAGGCTACGATAATGAGGCATTGTTCCTTACCTTCTAGAGATATGCGACTTTTGGATCCTCTCTTCCTTTGTCCATCCACAATTCTTGGAAGGGAGAAGGCAATTGTTGTCAGTCTTGAGCAAATTCGTTGTGTAATTACATCTGATGAGGTTTTTTTAATGAACTCCTTGGATGGATGTGCTGCACAGTACAAATCAGAGCTATGCAAGCGTCTTCAGGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCACTGGAACTTACTTGCTCACTTCTTGACGCTCAGGTGAAGGGGATGGAAGGGGAGATATACCCTCTACTGGATGATTTAGCATCTTCAATAAACACACTTAATCTCGAGAGAGTTCGAAGATTTAAAGGCAACCTTCTGACCTTGACTCAACAAGTGCAAAAGGTGCGTGATGAAATTGAACATTTGATGGATGATGATGGGGATATGGCTGAGATGTATCTGACAGAGAAGAAACGAAGAATGGAGGCAAACATCCGAAGTAACTTGTATTTGGAAGCTAGTTTCTTTGGGAAACAGCCACCAAAATCTGCTCCTGTTTCGCCAGTGGGTTCTGCCAATGGAATTTACAAATTACAAAGGGCTTTTAGCAGTATTGTGAACTCAAGCAGCTTGATGAGTTCCTCGACCAGCGGAGATAACATCGAACAATTGGAGATGCTGCTTGAAGCATACTTTGTGGTCATTGACGACATGCTCAGTAAATTGTTATCACTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCAGCAACATTCTTGGCTACAATGTTTGCAGCTTTAACCGCGGTTTTTGGCATGAATTTTGTCGATGATGTCTTCGATCATCCAAGTTCTTTCCAGTTGATAGTTTACTTCACCTTGATTGCCTGTGGCCTTGTGTATTTTGGTTTTCTTTTCTATTTTAGGTACAAGAAAATATTCCCACTGTAG 1143 41.38 MDASRGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCVITSDEVFLMNSLDGCAAQYKSELCKRLQANKDQSDDLPFEFRALELALELTCSLLDAQVKGMEGEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVRDEIEHLMDDDGDMAEMYLTEKKRRMEANIRSNLYLEASFFGKQPPKSAPVSPVGSANGIYKLQRAFSSIVNSSSLMSSSTSGDNIEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFVDDVFDHPSSFQLIVYFTLIACGLVYFGFLFYFRYKKIFPL* 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18604466 18607698 - CsaV3_6G033700.1 Csa06g02083 533710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02083 380 Gene3D Magnesium transport protein CorA, transmembrane region 91 311 - -
Csa06g02083 380 CDD Mrs2_Mfm1p-like 17 377 IPR039204 -
Csa06g02083 380 Gene3D - 3 88 - -
Csa06g02083 380 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 380 IPR039204 -
Csa06g02083 380 Coils Coil 169 189 - -
Csa06g02083 380 PANTHER MAGNESIUM TRANSPORTER MRS2-5 4 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02968 Csa-Chr3:28242018 Csa06g02083 Csa-Chr6:18604466 1.45E-141 dispersed
Csa06g02083 Csa-Chr6:18604466 Csa07g00672 Csa-Chr7:4803779 2.83E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02083 K16075 - csv:101220835 688.723