Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02132 ATGGAAGCACAGATGAGTACGGCGGCAACACCGTCCTTTGGTGGTGGCAGCAATCGCATAGCGGCGGTTAACATCACAACTCCAACCAACGCCCTCAAGCCACAGAATCACCAAGAAGGAAAAAACACCACCCATCAGAAACCTGGATGGAGAAAGTTCCTATCATACGTTGGCCCTGGGTTTCTCGTCTCATTAGCGTACCTTGATCCCGGCAACCTGGAAACGGACTTGCAGGCCGGAGCTAATCACGGGTTCGAGCTTCTATGGGTGGTGCTTATCGGATTAATATTTGCACTCATAATTCAATCCCTTGCTGCAAATCTTGGCGTAAGCACCGGAAAACATCTTTCAGAAGTGTGCAAAGCCGAATATCCAAAATTTGTGAAGTATTGTCTTTGGTTGTTAGCTGAAGTTGCTGTAATAGCAGCCGATATTCCAGAAGTGATAGGAACAGCCTTTGCTCTGAATATTCTATTCCATATTCCTGTTTGGGCTGGAGTTCTCCTCACTGGTTTAAGTACCCTTCTGCTTCTTGGTCTCCAAAGATATGGGGCGAGGAAGCTGGAACTGTTGATAGCAATATTAGTGTTCGTAATGGCGGCGTGTTTCTTCGGAGAAATGAGCTACGTGAAGCCTCCGGCGAGCGGTGTTTTAAAAGGAATGTTTGTTCCAAAGCTCAAGGGCGAAGGAGCCACCGCGGACGCCATTGCTCTTCTGGGAGCCCTCGTTATGCCGCACAACCTGTTTCTTCATTCCGCTCTCGTGCTCTCAAGGAAAGTCCCCAATTCCGTCCGTGGTATCAACGACGCGTGTAGGTACTTCCTAATAGAGAGCGGAATTGCATTGTTCATAGCATTTTTAATAAACGTTGCCGTTGTTTCTGTTTCCGGCACCGTTTGTACCGTCGGAAATGTCACCCAAACAACCGCCGATCAATGCTCCGACATAACTCTCAACTCCGCCTCCTTCCTCCTCCAGAATGTATTGGGAAAATCAAGCTCCACTATTTACGCCATAGCGTTATTTGCATCGGGACAAAGCTCCAGCATCACCGGCACTTATGCCGGTCAGTTCATCATGCAGGGATTTTTGGACTTGAAAATGAAAACATGGGCAAGAAATCTAATGACAAGGTCCATTGCAATAACGCCAAGTCTCATCGTCTCCATCATTGGCGGTCCTCAAGGAGCTGGTCGTCTCATCATTATTGCATCCATGATCCTTTCCTTCGAGCTTCCGTTTGCTCTAATTCCACTACTCAAATTCAGTAGCAGCAGCACCAAGATGGGCCCTCACAAGAACTCCATATACATCATTGTAATCTCATGGATATTGGGCCTGGCAATCATCGGCATCAACATCTATTATCTCAGTACCGCCTTCGTGGACTGGCTAATTCACAATAATTTACCCAAAGTTGCAAATGTTTTCATCGGGATCGCTGTGTTTCCCTTAATGGCTGCCTACATTGGTGCCGTTATTTACCTAATGTTTCGAAAAGATAGGGTTGTGACTTACATTGAACCCGAGAAGGACGATGCTGTGGCTCAAGCCCATTTGGAAAGTGGGCTTAATAATTCTTTTGGGCCTCGTGACGTCACTCCACTGCCTTTCAGAGAGGACTTGGCCCATATTCCACTACCAGAATAG 1650 47.09 MEAQMSTAATPSFGGGSNRIAAVNITTPTNALKPQNHQEGKNTTHQKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHGFELLWVVLIGLIFALIIQSLAANLGVSTGKHLSEVCKAEYPKFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRYGARKLELLIAILVFVMAACFFGEMSYVKPPASGVLKGMFVPKLKGEGATADAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGIALFIAFLINVAVVSVSGTVCTVGNVTQTTADQCSDITLNSASFLLQNVLGKSSSTIYAIALFASGQSSSITGTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTAFVDWLIHNNLPKVANVFIGIAVFPLMAAYIGAVIYLMFRKDRVVTYIEPEKDDAVAQAHLESGLNNSFGPRDVTPLPFREDLAHIPLPE* 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19055175 19060391 + CsaV3_6G034190.1 Csa06g02132 533759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02132 549 Hamap Divalent metal cation transporter MntH [mntH]. 36 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 51 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 Pfam Natural resistance-associated macrophage protein 74 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 43 549 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PANTHER METAL TRANSPORTER NRAMP5 43 549 - -
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 132 158 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Csa06g02132 549 PRINTS Natural resistance-associated macrophage protein signature 405 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02976 Csa-Chr3:28377168 Csa06g02132 Csa-Chr6:19055175 0 dispersed
Csa06g02132 Csa-Chr6:19055175 Csa06g02579 Csa-Chr6:22783114 4.86E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02132 K21398 - csv:101219356 1043.88