Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02492 ATGGAACTCAGAAAGTACAAACCTGCCTTCCTCCTCCTCCTCTTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAGGAATGGACCGCCGGTAAAACCTTCGGCCTCGGTGATTTTCTAATTTTCAACACGGACAACAACCACTCGGTTGTGCAAACATACAATGTCACCACATACAAGCTTTGTGACTACGACGACGCATCAGATCACGATACGACGGAATGGTCTGCCGCTGATCCGTCCGCAACCACTCCCTACCCCGTCACGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTACTTCTTCTCTGGCAACTACGACGGAGAGCAGTGCCAAAATGGGCAACAGTTCAACATAAATGTCACCCATGGACAGGGCCTCCCTAAAAGCATGAGAGATCCTTCGGAGGAAGCTCCGGCTCCGGTAGTTCCTGACACCGGCGATCAAACCGAATCTGCACCAGACACCATTATCCCTTCCAGCTTCGACAATCCTCGAAACGATGTGGCCGATAATAATAACGATAAGGAATCTTCCGGCTCCAATTCGTTATCGCTTATTTATTGCTTCAAGTTTAATGAGTTTTTGTTCTTGTTAGTTGGTATTGCTTCTGCCTGCTTTTTGTCTTTGTACTGA 711 50.07 MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY* 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22197775 22202408 + CsaV3_6G038780.1 Csa06g02492 534119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02492 236 CDD Phytocyanin 28 146 - -
Csa06g02492 236 Gene3D - 26 149 IPR008972 -
Csa06g02492 236 MobiDBLite consensus disorder prediction 174 206 - -
Csa06g02492 236 ProSiteProfiles Phytocyanin domain profile. 28 148 IPR003245 GO:0009055
Csa06g02492 236 PANTHER BNAA08G26900D PROTEIN 12 174 - -
Csa06g02492 236 MobiDBLite consensus disorder prediction 148 206 - -
Csa06g02492 236 Pfam Plastocyanin-like domain 38 140 IPR003245 GO:0009055
Csa06g02492 236 PANTHER BLUE COPPER PROTEIN 12 174 IPR039391 GO:0009055
Csa06g02492 236 SUPERFAMILY Cupredoxins 28 146 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02492 Csa-Chr6:22197775 Csa02g02171 Csa-Chr2:19559517 1.22E-12 dispersed
Csa06g02492 Csa-Chr6:22197775 Csa06g00608 Csa-Chr6:5149641 1.80E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02492 - - csv:101203070 493.426