Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g02515 | ATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCGAATTGACAGATGCGGTTCAAGGACTAGTTCTTTGCGATCAGAGCGATAAAGATCGGAGGGCTATGGCAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCTGTTCAAGAACAAGTAACTTGCGACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATCTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCATCATACACTAAGAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCTTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCCAATCATTGAAGAACGGGAGGAAACATATGATGATCCTGAGGATGACCAATACTATCCTTATGAGGATGATGATGAAGAGTTAGAGGATGCTTACTTGGGTGAATCACCATCTCTTCGCATTGGGAATCGAAGGTGGGGATACAATGGTTATGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCCGTAACAAAACAGGCTTCTTCCAAGGACAAAACAGGCCGACGTGCTAAAAGGGCCTTGAAACGAGAAGCTGCAGATAAAGCAGCAGCAGCCAAGCATCAAGAGCATCTGGCTAGGTTTGGCCGGAAGTGA | 831 | 46.69 | MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK* | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 22363926 | 22367461 | - | CsaV3_6G039010.1 | Csa06g02515 | 534142 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g02515 | 276 | SMART | ring_2 | 79 | 121 | IPR001841 | - | |
Csa06g02515 | 276 | MobiDBLite | consensus disorder prediction | 223 | 276 | - | - | |
Csa06g02515 | 276 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 145 | IPR013083 | - | |
Csa06g02515 | 276 | Pfam | Ring finger domain | 78 | 122 | IPR001841 | - | |
Csa06g02515 | 276 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 39 | 276 | - | - | |
Csa06g02515 | 276 | MobiDBLite | consensus disorder prediction | 237 | 276 | - | - | |
Csa06g02515 | 276 | ProSitePatterns | Zinc finger RING-type signature. | 97 | 106 | IPR017907 | - | |
Csa06g02515 | 276 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 122 | IPR001841 | - | |
Csa06g02515 | 276 | SUPERFAMILY | RING/U-box | 78 | 129 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g02515 | - | - | csv:101206609 | 489.189 |