Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02586 ATGGCCCTAGTCGAGACCATTTCCAAGAGCTCCATTCATGACCCACTCAATTGGGGTGTGGCTGCTGATTCCCTCAAGGGAAGCCATTTTGATGAGGTGAAGCGCATGGTAGAGGAGTATCAAAGGACCCTTGTCAAGCTTGATGGTGAGACACTCACTGTCTCTCAAGTTGCTGCTATCGCTACTAGGAATTCTGATGTTATTGTTGAGCTTTCAGAGTCTACTAGAGTTGGTGTTAAAGCTAGTAGTGATTGGATTATGGAGAGTTTAAATAAAGGAACTGATAGTTATGGCATCACTACTGGATTTGGTGCTACATCCCATAGAAGAACCAAACAAGGTGGGGCCCTCCAAAAGGAGCTTATTAGATTCTTAAATGCTGGGATTTCTGAAAGTGGGACTGAGTCAAGCCATACTTTGTCCCACTCAGCTACGAGGGCAGCCATGTTGGTGAGGACTAACACCCTACTTCAAGGCTACTCAGGTATTAGATTTGAGATTTTGGAAGCCATTATAAAACTTCTAAATCATAACATCACTCCATGTTTGCCTCTTCGTGGAACTGTTACTGCCTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTTATTGGTCGACCAAACTCTAAAGCTATTGGTCCAAATGGAGAAAATCTTGATGCAAAGGAGGCTTTTATACATGCTGGTATTACTTCTGGGTTCTTTGAGTTTCAACCTAAGGAAGGTTTTGCTCTTGTCAATAGCACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTATTTGAAGCAAATATTTTGGCTGTATTGTCCGAGATTTTGTCGGCCATCTTTGCTGAAGTTATGCAAGGTAAGCCTGAATTTACTGACCATTTAACCCACAAATTAAAGCATCATCCTGGACAAATTGAAGCAGCTGCAATCATGGAACACATTTTAGATGGGAGTTCTTACATGAAAACGGCTAAGAAGTTGCATGAAATGGATCCTCTTCAAAAGCCAAAACAAGACCGTTATGCTCTTAGAACTGCTCCTCAATGGCTTGGTCCACTAATTGAAGTTATTCGGTTCTCAACAAAATCCATTGAGCGAGAGATTAATTCAGTCAATGATAACCCTTTGATTGATGTTTCAAGGAACAAGGCTTTGCATGGAGGCAACTTTCAAGGAACTCCAATCGGAGTTTCTATGGACAATACTCGTCTTGCCATTGCTTCAATTGGAAAGCTTATGTTTGCCCAATTCTCAGAACTCGTCAATGATTTCTACAATAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCGAGCTTGGATTATGGGTTTAAAGGTGCTGAAATCGCTATGGCTTCATATTGCTCTGAGCTTCAATATCTTGCAAATCCAGTGACAACTCATGTTCAGAGCGCTGAGCAACACAACCAAGATATTAACTCTCTTGGTTTAATTTCCTCAAGAAAAACAGCCGAAGCCATTGACATTCTAAAACTCATGTCTTCTACATTTTTAGTTGCTTTATGCCAAGCAATTGACTTAAGACATTTAGAGGAAAACTTGAAGAGTGCTGTTAAAAGCACTATAATCCTTGTAGCACAGAAGGTTTTGATAACATCCACTAATGGTGCACTAGATCCCTCAAGATTGTTCGAGAAAAACTTATTGAAAGTTGTCGATAGAGAGTACACTTTTGCCTATATAGATGACCCGTGCAGTGCTACTTACCCATTGATGCAAGGATTGAGACAAGTTTTCGTTGAGCATACACTTGCTAATAGTGATGATGAAAATAATGCAGACACACCAATCTTCCAAAAGATTGCTATTTTTGAAGCGGAATTAAAGGCAATCTTGTCAAATAAAGTTGAAAGTACAAGGTTAGCATATGAAAGTGGAAATGCACTAATTAAGAACCAAATTGAGGAATGCAGATCTTACCCATTATATAGATTTGTGCGAGAAGAGTTGGGAATAAAATTGCTAACTGGTGAAAAGGTGATATCTCCGGGAGAAGAGTGTGAAAAAGTATTTGCAGCTTTGTGTAAGGGAAAGATGATCAATTCTATCTTAGAATGTTTAAAGGAGTGGAACGGTGCTCCAATTCCTATATGTTAG 2118 39.9 MALVETISKSSIHDPLNWGVAADSLKGSHFDEVKRMVEEYQRTLVKLDGETLTVSQVAAIATRNSDVIVELSESTRVGVKASSDWIMESLNKGTDSYGITTGFGATSHRRTKQGGALQKELIRFLNAGISESGTESSHTLSHSATRAAMLVRTNTLLQGYSGIRFEILEAIIKLLNHNITPCLPLRGTVTASGDLVPLSYIAGLLIGRPNSKAIGPNGENLDAKEAFIHAGITSGFFEFQPKEGFALVNSTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTAPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDINSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSAVKSTIILVAQKVLITSTNGALDPSRLFEKNLLKVVDREYTFAYIDDPCSATYPLMQGLRQVFVEHTLANSDDENNADTPIFQKIAIFEAELKAILSNKVESTRLAYESGNALIKNQIEECRSYPLYRFVREELGIKLLTGEKVISPGEECEKVFAALCKGKMINSILECLKEWNGAPIPIC* 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22831929 22834362 - CsaV3_6G039720.1 Csa06g02586 534213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02586 705 Gene3D - 5 251 IPR024083 -
Csa06g02586 705 CDD PAL-HAL 50 515 IPR001106 -
Csa06g02586 705 PANTHER HISTIDINE AMMONIA-LYASE 6 705 IPR001106 -
Csa06g02586 705 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 187 203 IPR022313 GO:0016841
Csa06g02586 705 Gene3D Fumarase/aspartase (Central domain) 252 700 - -
Csa06g02586 705 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 14 695 IPR005922 GO:0005737|GO:0006559|GO:0016841
Csa06g02586 705 Pfam Aromatic amino acid lyase 52 519 IPR001106 -
Csa06g02586 705 Gene3D - 518 639 IPR023144 -
Csa06g02586 705 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 6 705 - -
Csa06g02586 705 SUPERFAMILY L-aspartase-like 14 705 IPR008948 GO:0003824
Csa06g02586 705 Coils Coil 30 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02584 Csa-Chr6:22823980 Csa06g02586 Csa-Chr6:22831929 0 dispersed
Csa06g02585 Csa-Chr6:22827837 Csa06g02586 Csa-Chr6:22831929 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02586 K10775 - csv:101219091 1377.46