Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02611 ATGGGAGGAAAGTGTCCTCACAGAAGCGTAAAGAAGCGGAGATACTCACACAAGACCGCTAGGCGAACGAAATTTCTTGTCAAAGGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACAAATGTTGGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA 360 49.17 MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMGMPDNGPKLMAM* 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22981615 22983518 - CsaV3_6G039970.1 Csa06g02611 534238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02611 119 Gene3D Classic Zinc Finger 45 109 - -
Csa06g02611 119 MobiDBLite consensus disorder prediction 1 20 - -
Csa06g02611 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Csa06g02611 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
Csa06g02611 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Csa06g02611 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Csa06g02611 119 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02611 K14821 - csv:101222807 253.832