Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02632 ATGGCTTCCTCTCTCTGCTTTCCCTCTCTCACTTTTCCTTCTTCTTCTCTCCACAAACGAATCCCTCTCACTCCACCAACAACCCCATTTCCATCTCTGTCCATTAAATCCTCCATTGACGAACGACGAAACTCCTCCACACCCCCCAAGATTAAGAACCCCACCAACGCTCCAAAATCCCGTTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGCTACATTACTCTAGGGCAGGGTGATGACTCCGGTATCCCCGTTGCAACTGCCAAGCTTGATGACGTTTCTGATCTTCTTGGGGGTGCTCTGTTCCTTCCTCTTTTCAAGTGGATGAATGACTATGGACCCATCTATAGACTCGCTGCTGGCCCTAGAAATTTTGTCATTGTTAGTGATCCCACCATTGCTAAACACGTTCTTAGGAATTATGGGACTTATGCTAAAGGCCTTGTTTCTGAGGTCTCTGAGTTCTTGTTTGGCTCGGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCGTCTCTTCACAAGAAGTACTTATCAGTTATTGTTGATCGGGTATTTTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTGAATAATAATTCAGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTCTCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCGTATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTAATCAGGAAAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTGGAAGCTGAAGGTGAGCGTATCAATGAGGAGGAATATGTGAACGATGCTGATCCAAGCATCCTTCGGTTTCTTCTAGCCAGTAGAGAAGAGGTCTCAAGTGTACAATTACGAGATGATCTATTGTCAATGTTGGTTGCTGGACATGAAACTACCGGTTCTGTTCTGACGTGGACACTCTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCTTATGAAGATACAAAGGAACTTAAATATTTGACACGTTGTATCCTCGAGTCCATGCGACTTTACCCACATCCACCGGTTTTGATAAGAAGAGCTCAAGTTGCTGACATACTCCCCGGAGATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTCATACCTGAAAGATTTGACTTGGAAGGTCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGTGGTGGACCTCGAAAGTGTGTCGGTGATCAATTTGCCTTGCTTGAAGCAATCGTTGCACTTGCCATATTTCTACAGCATATGAATTTTGAGCTGGTTCCGAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTTAGTCAAAGGAAGCTGACCCCAGAATTAGTTTCTTCTGCCACTTCAAGGTAA 1680 43.51 MASSLCFPSLTFPSSSLHKRIPLTPPTTPFPSLSIKSSIDERRNSSTPPKIKNPTNAPKSRSWVSPDWLTSLTRYITLGQGDDSGIPVATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVIVSDPTIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRKTVEELIAKCKEIVEAEGERINEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGDYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTPELVSSATSR* 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23173773 23180857 - CsaV3_6G040180.1 Csa06g02632 534259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02632 559 MobiDBLite consensus disorder prediction 23 62 - -
Csa06g02632 559 MobiDBLite consensus disorder prediction 30 62 - -
Csa06g02632 559 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS E-class P450 group I signature 343 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS E-class P450 group I signature 446 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 124 546 - -
Csa06g02632 559 Pfam Cytochrome P450 108 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Csa06g02632 559 PANTHER CYTOCHROME P450 FAMILY 4 124 546 - -
Csa06g02632 559 PRINTS P450 superfamily signature 354 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 Gene3D Cytochrome P450 91 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa06g02632 559 SUPERFAMILY Cytochrome P450 101 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00705 Csa-Chr3:6350641 Csa06g02632 Csa-Chr6:23173773 2.95E-162 dispersed
Csa04g00730 Csa-Chr4:4965833 Csa06g02632 Csa-Chr6:23173773 2.24E-137 dispersed
Csa06g02632 Csa-Chr6:23173773 Csa05g02527 Csa-Chr5:26782637 8.73E-43 dispersed
Csa06g02632 Csa-Chr6:23173773 Csa02g00167 Csa-Chr2:1164961 1.67E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02632 K09837 - csv:101204961 1097.42