Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02643 ATGGCCACTTCTGGGTTTCTTCTGTACCTTCTTTCTGCCTCTTCAATCGCCGTTCTCTCTCTTCTCTACCTCTCTGACTCTTCTTCTTCTTCTTCTTCCTCCACCACCGCCCTTTCCGCCTCTCTCTCCACCGACAAGACCTGGCCGGATTTGGAGCCGAGTTGGAGACTTGTGGCGGCGACGGTGATCGGATTTCTCGGCTCCGCTTGCGGAACCGTTGGAGGAGTCGGCGGCGGCGGCATTTTTGTCCCTATGCTTACGTTGATTATTGGGTTTGACACCAAATCTGCTGCTGCCATTTCCAAATGTATGATAATGGGAGCTTCTACATCATCGGTTTGGTACAATTTAAGGGTGGCTCATCCGACGAAGGATGTGCCGATTATAGATCATGATTTGGCGTTGTTGTTTCAACCCATGTTGATGCTTGGAATCACCGTTGGTGTTTCCCTTAGCGTTGTTTTCCCCTACTGGCTTATCACTATTCTCATCATTATTCTCTTTATTGGGACTTCCTCCAGGTCCTTCTTTAAGGGAATTGAGATGTGGAAAGAAGAAACTATTCTCAAGAAAGAATTTGCTAAACGATGTGAGACTGTTGTGAATTCTCATGGCGAACTATTGATTGATGTTGAGTATGACCCACTGATTCCCAAAGAACAGAAAACAGAACTGGAATTGATGTGCTTCAATCTAAGATGGAAAAGGACCTCCATTTTGTTTGCTGTTTGGATTTCTTTTCTCATACTTCAAGTTGTGAAGAATGATGTAGCAGCTTGTAGCATTTGGTATTGGGTCGTCTTCTTCTTGCAGTTCCCCATAGCAATTGTAGTGTTTGGGTATGAAGCAAGAAAGCTATACAAAGAACACAAGAAGAGGATGGAGGCAGGGAACTTGGAACAAATTTGTGAGGCTTCAATAGGATGGACTGGCTCACACCTTGCCTTTTGTGCACTTTGTGGCATTGTTGGAGGCACTGTTGGAGGCCTTTTGGGTTCTGGTGGTGGCTTTGTTTTAGGCCCTTTGCTCTTGGAAATTGGTGTTGTCCCTCAAGTTGCTAGTGCCACAGCAACTTTTGTTATGATGTTCTCCTCTTCCTTATCTGTTGTTGAATTCTACTTGCTCAACAGGTTTCCCATTCCATATGCTCTGTATCTGACATCAGTGTCGGTTCTGGCTGGGTTCTGGGGACAGTTCTTTGTTAGAAAGTTGATCACCATTCTAAGGAGAGCCTCACTCATTGTGTTTATCCTCTCTGGTGTTATCTTTGCTAGTGCCATCACCATGGGCATTGTTGGAGTAACGAAAAGTATAACCATGATACAGAACCATGAGTTCATGGGGTTCTTAGATTTCTGCAGCAGTGGGTGA 1371 45.0 MATSGFLLYLLSASSIAVLSLLYLSDSSSSSSSSTTALSASLSTDKTWPDLEPSWRLVAATVIGFLGSACGTVGGVGGGGIFVPMLTLIIGFDTKSAAAISKCMIMGASTSSVWYNLRVAHPTKDVPIIDHDLALLFQPMLMLGITVGVSLSVVFPYWLITILIIILFIGTSSRSFFKGIEMWKEETILKKEFAKRCETVVNSHGELLIDVEYDPLIPKEQKTELELMCFNLRWKRTSILFAVWISFLILQVVKNDVAACSIWYWVVFFLQFPIAIVVFGYEARKLYKEHKKRMEAGNLEQICEASIGWTGSHLAFCALCGIVGGTVGGLLGSGGGFVLGPLLLEIGVVPQVASATATFVMMFSSSLSVVEFYLLNRFPIPYALYLTSVSVLAGFWGQFFVRKLITILRRASLIVFILSGVIFASAITMGIVGVTKSITMIQNHEFMGFLDFCSSG* 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23255539 23261401 + CsaV3_6G040290.1 Csa06g02643 534270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02643 456 Pfam Sulfite exporter TauE/SafE 239 421 IPR002781 GO:0016021
Csa06g02643 456 Pfam Sulfite exporter TauE/SafE 62 177 IPR002781 GO:0016021
Csa06g02643 456 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 2 454 - -
Csa06g02643 456 PANTHER CEREBLON 2 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04438 Csa-Chr3:38724048 Csa06g02643 Csa-Chr6:23255539 4.90E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02643 - - csv:101206149 790.03