Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02649 ATGGCGGCAACGAAGGGGAAGCTAATTTACAAAGTATACAGAGCACTAAGCTACGGCCTCTCGCCATTGCTCTACCTTCACCTCCGATGGCGTGTGCTTCGTGGCCTCGAGCACCCTTTCCGATGGCCGGAGCGTCTTGGTCGACCTTCTCATGCTCGTCCTCCCGGTCCACTCCTCTGGTTCCATGCCGTCTCTTTAGGAGAAGGTTTGGCTACTATTCCTATAATTAAGCAATGTATTCAGAGAAGGCCTGATTTGGTCGTTTTGATGACTACAACCACTTATTCTGCCTTTCAGGTAGTGAAGAATTGTCTTCCTACCGATGTCATATATCAGTTTGCCCCACTTGATACAGCTGCTGCCATAGACACTTTCATTGAATATTGGAAGCCTAAAGTTATTATTTTAATGGAGAGTGAACTTTGGCCTAATCTTATCTTGGGTGCTTCACAGCGTGGTATTGCTATGGCATTGTTAAATGCTCGGATGTCAGCTATGTCTTTTAATCGATGGTCAATTCCAGTGTTTCTTCCCCTGATTTCCTTTATGCTGTCAAAGTTCTCATTGATTCTCCCATTGAGCAATCTACAGGCCATACGGTTCCAGCTACTGCAGGCTTCACCACTGGTCATCAGTTTTGCTGGTGATCTGAAATTTGCCGTTGAAGATGTTGGTATGTCAAAGGAAGAGATCAAAAAGGTTGAAGATCTAAGATCACAGTTGGCTCATAGACAAGCTTGGATGGCTTCCTCCATACATAGAGGAGAAGAAGAAGTTATACTTCAAGTTCACAGAATGCTCTTAGAAGCACACCCAAATCTAGTAACTGTTATTGTACCTCGACATCCACAGCATGGAAAAGAGATTGCTTTAGAAATGAAGAAAGAAGGGCAGAATGTAGCTTTGAGGTCTCAAGGTGAAAACATTACATCAGGAACGAACGTATACATTGTAGACACATTAGGTGAATTAAGGTATTTGTATGGAATAACCTCCATTGCTGTGGTTGGAGGATCCTTCTTGCCTGGTCTTGCTGGTCACAACATATCAGAAGCTGCTGCAGCTGGTTGTGCTGTATTGACTGGTCCACATATTGGCCATTTCTCAAGCATGGTGGCTAAACTGCAGCAGTTTAATCCAATGTCGGTTTTGCAGGTTCATGGAAAAGTGGACCTTGAAGAAGCTATAAAATATCTGCTTAAAGACGACAAAGTTTTGGAAGCGCACCGAATGGCCGCTAAACAGGCGCAGCAAGCTCTGGCGAGTGGCATTATTGTTGGTACTTGGAACTCACTAAATTCCAATGTTCTGAGAAGTGCTTTTGGGTAG 1329 44.09 MAATKGKLIYKVYRALSYGLSPLLYLHLRWRVLRGLEHPFRWPERLGRPSHARPPGPLLWFHAVSLGEGLATIPIIKQCIQRRPDLVVLMTTTTYSAFQVVKNCLPTDVIYQFAPLDTAAAIDTFIEYWKPKVIILMESELWPNLILGASQRGIAMALLNARMSAMSFNRWSIPVFLPLISFMLSKFSLILPLSNLQAIRFQLLQASPLVISFAGDLKFAVEDVGMSKEEIKKVEDLRSQLAHRQAWMASSIHRGEEEVILQVHRMLLEAHPNLVTVIVPRHPQHGKEIALEMKKEGQNVALRSQGENITSGTNVYIVDTLGELRYLYGITSIAVVGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHFSSMVAKLQQFNPMSVLQVHGKVDLEEAIKYLLKDDKVLEAHRMAAKQAQQALASGIIVGTWNSLNSNVLRSAFG* 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23301473 23307743 - CsaV3_6G040350.1 Csa06g02649 534276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02649 442 Pfam 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 41 220 IPR007507 -
Csa06g02649 442 Gene3D - 40 219 IPR038107 -
Csa06g02649 442 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 431 - -
Csa06g02649 442 Gene3D Glycogen Phosphorylase B; 228 419 - -
Csa06g02649 442 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 8 439 IPR039901 GO:0016740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02649 K02527 - csv:101207342 874.389