Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02722 ATGTACAGCTACCAATCTACTTTGAAGCAGCTATTCCAAGATTTTGACGCTAGTGATCCAGATGCTCAGATAGCAGTGGTAACTACAAGAATCATGCAGGCCCTTCAGACTAATCTTGATGGGAAATCTAAACAATATAGGGATCCTGCACTAACTCAATTATTTCTTATGAACAATATTCACTATATAGTGAGATCCGTCCGAAGATCGGAGGCAAAGGATTTGCTGGGTGATGACTGGGTGCAGATACATCGACGGGTTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACAGTTCAGGCCTCAGGTAGTGGTGGTGGTTCGGGAGATGCTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTCAAGACTTTTAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGAGAGTCATTAAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCTTACCGATCCTTCATCAAGCGTTTCGGGCATGTTCCTCATTTATTTCACTTTACAATAATCTAA 582 43.13 MYSYQSTLKQLFQDFDASDPDAQIAVVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRVVQQHANQYKRISWAKILQCLTVQASGSGGGSGDASSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGHVPHLFHFTII* 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23824017 23825568 - CsaV3_6G041080.1 Csa06g02722 534349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02722 193 SUPERFAMILY Cullin repeat-like 2 183 IPR016159 -
Csa06g02722 193 Gene3D Exocyst complex component Exo70 1 189 - -
Csa06g02722 193 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 183 IPR004140 GO:0000145|GO:0006887
Csa06g02722 193 Pfam Exo70 exocyst complex subunit 2 186 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa06g02722 193 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 2 183 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03108 Csa06g02722 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02722 Csa-Chr6:23824017 Csa05g02705 Csa-Chr5:27858578 2.25E-99 dispersed
Csa06g02721 Csa-Chr6:23807554 Csa06g02722 Csa-Chr6:23824017 1.37E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02722 K07195 - csv:105436018 343.969