Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02723 ATGGGAGTTCCACAGGCCATGGAAATTCTCACCGAGAGAGCCGCACTTGTTCGAGAGTCGCTTCAGAAGAGCCAGAATGTCACCGAGAACATGGTCTCCATTCTCGGTTCTTTCGACTACCGTCTCTCCGCCCTCGAAACCGCAATGCGCCCCACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGGCTGCAGAAAGTATGCTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGACCACATGAGGACTTAGAGATGTACTTGGAAGCAATTGATCAATTACGAAGCACAAATCGCTACTTTACTGGGAACAAAAATTTCAAAAGTAACGAAGCTATTCTTATCCACACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGCTAGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCTGATCGTCTATTTGATTGCCTCCCCAACAATTTGCGTCCATCATCAGCATCTGCACACCATGGTGATAGTGGTAGCAAAATTAACTCTGACCAACAGAACAAAAGCTTAGAAGCTGCCGTCTTCATTCCACCAACTCTAATTCCGCCCAGGGTTCTTCCATTGTTGCATGACTTGGCTCAACAAATGATTCAGGCTGGTCATCAGCAGCAGCTGTTTAGAATATACAGGGATACTCGCGCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAAGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCGGTCAAACTGCTGTTTGCTGGGGAAAGGAAAATTTGTGATCAAATTTTTGACGGTGCAGACTCTCTCCAAGATCAATGCTTTGCTGATGTGACTTCAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGAGGCCATTGCCAGAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTATGAAATAATGCGAGAACTGCAGTCTGAGGTTGAAACACTTTTTGGAAGTAAAGCATGTATTGAAATGCGGGATTCTGCATTGAGCTTAACCACACGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACGGCAGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATCAATTACGTCAAGTTTCTGTTTGAGTAA 1266 43.68 MGVPQAMEILTERAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRYFTGNKNFKSNEAILIHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNNLRPSSASAHHGDSGSKINSDQQNKSLEAAVFIPPTLIPPRVLPLLHDLAQQMIQAGHQQQLFRIYRDTRASVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGADSLQDQCFADVTSNSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELQSEVETLFGSKACIEMRDSALSLTTRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFE* 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23826020 23831182 - CsaV3_6G041090.1 Csa06g02723 534350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02723 421 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 421 IPR004140 GO:0000145|GO:0006887
Csa06g02723 421 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 421 - -
Csa06g02723 421 SUPERFAMILY Cullin repeat-like 76 421 IPR016159 -
Csa06g02723 421 Pfam Exo70 exocyst complex subunit 273 421 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa06g02723 421 Gene3D Exocyst complex component Exo70 75 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02723 Csa-Chr6:23826020 Csa03g02774 Csa-Chr3:26573177 1.74E-58 dispersed
Csa06g02721 Csa-Chr6:23807554 Csa06g02723 Csa-Chr6:23826020 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02723 K07195 - csv:105436018 809.29