Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02901 ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGAGCTGGGTGGCAGGTACAACGCTGCTAACCAGAGAGCAATTGAAGCTCTGGAGAAGTTTGGTGCAGCACTGATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCCCAGATAAATTCGAAAGATCATGCTGACAAACATTCTCGCCCCAAATCGTTAAGTATTGAAGAAGAGCAGTTTATGCGAGTATTTTATGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCTGTGATGCAACATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTACGAGATGATAGTTTATCAGAGTCTGGAATTTGACCTTATTGTTTATGCACCTTATCGGTCAGTTGAAGGATATGTAAATGATATTGAGGAACTCTTTAATGAGAATGCTGAAATGCTTCAAATGCTGAAGGTAACAGCATCATTGGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTCATTGACTTTAATAGCTACCTCGATAGTATCCTCTCTCGCCAGAATTCCACACATACAATTTCTGAGCTCTACGAGGGTATTAATGCAATTGAATCGTTGGTTAATCGGTATGCTTTCCCTTCAGAAAAGGATTTGAAGCACATCAACCGAAAATTAAAATCATGCTGGGGACTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAGAAGTTCGAATGAAATGCAAAACAGGCCTCTGCAGAATTAG 999 40.14 MADFQTSTQRAKWILSPQELGGRYNAANQRAIEALEKFGAALMEVDADGSLSYPDPQINSKDHADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENAEMLQMLKVTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHTISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSSNEMQNRPLQN* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25204275 25212471 + CsaV3_6G042870.1 Csa06g02901 534528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02901 332 MobiDBLite consensus disorder prediction 299 332 - -
Csa06g02901 332 Pfam Cyclin, N-terminal domain 68 174 IPR006671 -
Csa06g02901 332 CDD CYCLIN 81 167 IPR013763 -
Csa06g02901 332 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Csa06g02901 332 PANTHER CYCLIN-H 1 328 - -
Csa06g02901 332 Gene3D - 63 175 - -
Csa06g02901 332 SUPERFAMILY Cyclin-like 67 176 IPR036915 -
Csa06g02901 332 Pfam Cyclin C-terminal domain 179 277 IPR031658 -
Csa06g02901 332 SMART cyclin_7 87 168 IPR013763 -
Csa06g02901 332 Gene3D - 177 279 - -
Csa06g02901 332 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02901 K06634 - csv:101220754 653.669