Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02923 ATGAAAGATAACTCCTCCAAATATGTTGTTGTTTTGGTTATAAGCTTCTTTTTCTTGAATCAGGTCCTTGTGTCCTCACAACTTGATTATAGGTTCTACGATGCCTCTTGTCCCAATCTAACAAGGATTGTCAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCCCTCCTACGGCTTCATTTTCATGACTGCTTTGTCAACGGTTGTGATGGATCATTGTTGCTTGACGACACTAACACATTTAAGGGGGAGAAAAATGCATTGCCGAATGTGAACTCAGTTCGAGGCTACGAAGTTATTGATAATATAAAGGCTGTCTTAGAGAAATTCTGTCCATCTGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAAGCTGTCTACCTGGCTGGGGGACCATTTTGGCAAATTCCTCTTGGTCGTCGAGACGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCGTCACCAGTGGAGCCATTGGAGGATATCATTGCGAAATTCACTTCGAAAGGCTTCAATGTGAAGGATGTTGTTGCTCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGTATGATGTTCAAGCATAGGCTGTTCAACTTTGACGGCGCTGGAAATCCCGATCCAGAACTCGATGTCATGCTGCGACAGAACTTACAGAACAACTGTCCAAATCAAGATGATTCCAACAACAAATTCGCCCCCTTAGATGCGTACACGATCAACCGGTTCGACAATGTGTATTATAGGAACTTGGTGAACAAGTTGGGACTCCTGCAGTCAGACCAAGATCTCATGAAAGACAATACAACTGCTTCTTTGGTGGTGAGCTACAGCAGGTATCCGTATATGTTTTACAGGGATTTTGGAGCATCAATGGTGAAGCTAGCCAATACTGGGATCCTTACAGGCCAAAATGGGGAGATTAGGAAGAATTGCAGGGTGGTGAACTAG 984 44.51 MKDNSSKYVVVLVISFFFLNQVLVSSQLDYRFYDASCPNLTRIVRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTNTFKGEKNALPNVNSVRGYEVIDNIKAVLEKFCPSVVSCTDIVTLAAREAVYLAGGPFWQIPLGRRDGTTASESEANQLPSPVEPLEDIIAKFTSKGFNVKDVVALSGAHTFGFARCMMFKHRLFNFDGAGNPDPELDVMLRQNLQNNCPNQDDSNNKFAPLDAYTINRFDNVYYRNLVNKLGLLQSDQDLMKDNTTASLVVSYSRYPYMFYRDFGASMVKLANTGILTGQNGEIRKNCRVVN* 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25335342 25337219 + CsaV3_6G043090.1 Csa06g02923 534550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02923 327 PANTHER PEROXIDASE 14 326 - -
Csa06g02923 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Csa06g02923 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Csa06g02923 327 Gene3D Peroxidase, domain 2 164 306 - -
Csa06g02923 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Csa06g02923 327 Pfam Peroxidase 49 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PANTHER PEROXIDASE 72-RELATED 14 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g02923 327 Gene3D - 31 327 - -
Csa06g02923 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01360 Csa-Chr4:13778724 Csa06g02923 Csa-Chr6:25335342 5.35E-123 dispersed
Csa06g02923 Csa-Chr6:25335342 Csa06g01604 Csa-Chr6:13801029 2.60E-100 dispersed
Csa07g01953 Csa-Chr7:19247809 Csa06g02923 Csa-Chr6:25335342 3.49E-87 dispersed
Csa01g00998 Csa-Chr1:6211462 Csa06g02923 Csa-Chr6:25335342 8.03E-87 transposed
Csa06g00217 Csa-Chr6:1493533 Csa06g02923 Csa-Chr6:25335342 1.68E-114 transposed
Csa06g01138 Csa-Chr6:9459660 Csa06g02923 Csa-Chr6:25335342 2.86E-86 transposed
Csa02g01200 Csa-Chr2:11798159 Csa06g02923 Csa-Chr6:25335342 3.69E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02923 K00430 - csv:101218459 665.996